RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 PAX1P15863 534 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 CD53P19397 219 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 FASP25445 335 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 CDKN2AP42771 156 aaKnown RBP12.54□□□□□ -0.4
PTPN18-204ENST00000420717 PTDSS1P48651 473 aaKnown RBP12.54□□□□□ -0.4
PTPN18-204ENST00000420717 ERFP50548 548 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 LCN6P62502 163 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 TUBA1BP68363 451 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 TUBA4AP68366 448 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 NAAAQ02083 359 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 SPOCK1Q08629 439 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 KPNB1Q14974 876 aaKnown RBP12.54□□□□□ -0.4
PTPN18-204ENST00000420717 SLC36A2Q495M3 483 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 TUBA1AQ71U36 451 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 ZBTB46Q86UZ6 589 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 MYPOPQ86VE0 399 aaPredicted RBP12.54□□□□□ -0.4
PTPN18-204ENST00000420717 PARP8Q8N3A8 854 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 IL17RDQ8NFM7 739 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 OR5K1Q8NHB7 308 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 AKAP1Q92667 903 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTPN18-204ENST00000420717 NRGNQ92686 78 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 GTPBP3Q969Y2 492 aaKnown RBP12.54□□□□□ -0.4
PTPN18-204ENST00000420717 RAB3IPQ96QF0 476 aaPredicted RBP12.54□□□□□ -0.4
PTPN18-204ENST00000420717 DDOQ99489 341 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 BDH2Q9BUT1 245 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 LIME1Q9H400 295 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 POLE4Q9NR33 117 aa12.54□□□□□ -0.4
PTPN18-204ENST00000420717 IGLV1-36A0A0B4J1U3 117 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 H3BNX3 289 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 SOCS2O14508 198 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 DANCRP0C864 163 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 GAAP10253 952 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 HIST1H1CP16403 213 aaKnown RBP12.53□□□□□ -0.4
PTPN18-204ENST00000420717 MSR1P21757 451 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 CRABP1P29762 137 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 CDH11P55287 796 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 KCNMB1Q16558 191 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 ZNF362Q5T0B9 420 aaPredicted RBP12.53□□□□□ -0.4
PTPN18-204ENST00000420717 DNM1P34Q6PK57 102 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 DTX2Q86UW9 622 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 HIPK1Q86Z02 1210 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 ZNF584Q8IVC4 421 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 C10orf67Q8IYJ2 551 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 HS3ST5Q8IZT8 346 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 SVOPLQ8N434 492 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 NUP37Q8NFH4 326 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 OR2T33Q8NG76 320 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 OSBPL10Q9BXB5 764 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 CXXC4Q9H2H0 198 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 C1orf198Q9H425 327 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 TBC1D23Q9NUY8 699 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 FKBP7Q9Y680 259 aa12.53□□□□□ -0.4
PTPN18-204ENST00000420717 DSCAMO60469 2012 aa12.52□□□□□ -0.4
PTPN18-204ENST00000420717 IGHV2OR16-5A0A0B4J2B6 119 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 ICMTO60725 284 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 KHDRBS3O75525 346 aaKnown RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 SNAP29O95721 258 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 RAB36O95755 333 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 CRYAAP02489 173 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 SERPINA5P05154 406 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 CELA3BP08861 270 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 OSMP13725 252 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 CDAP32320 146 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 GIPRP48546 466 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 IDH3GP51553 393 aaPredicted RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 RAB1AP62820 205 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 ENDOGQ14249 297 aaKnown RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 TESK1Q15569 626 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 PGGHGQ32M88 737 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 SLC36A3Q495N2 470 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 CLEC12AQ5QGZ9 265 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 ALKBH2Q6NS38 261 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 ZNF544Q6NX49 715 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 TMEM53Q6P2H8 277 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 B3GLCTQ6Y288 498 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 SLC16A14Q7RTX9 510 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 GLB1L2Q8IW92 636 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 NPEPL1Q8NDH3 523 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 OR4Q3Q8NH05 313 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 FGFBP3Q8TAT2 258 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 NSMAFQ92636 917 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 PIGTQ969N2 578 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 CENPNQ96H22 339 aaPredicted RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 FOXC2Q99958 501 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 SH3GL3Q99963 347 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 TSSK6Q9BXA6 273 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 NMNAT2Q9BZQ4 307 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 NUAK2Q9H093 628 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 SEC61A2Q9H9S3 476 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 UBTD1Q9HAC8 227 aa12.52□□□□□ -0.41
PTPN18-204ENST00000420717 BEX4Q9NWD9 120 aaPredicted RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 PRRC2AP48634 2157 aaKnown RBP12.52□□□□□ -0.41
PTPN18-204ENST00000420717 OR6C68A6NDL8 312 aa12.51□□□□□ -0.41
PTPN18-204ENST00000420717 E7EQL1 145 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms