RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 HSPB2A8KAH6 182 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 H7C1C5 153 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 FREM3P0C091 2139 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 LAP3P28838 519 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 TIMP3P35625 211 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SELENOPP49908 381 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 LSM6P62312 80 aaKnown RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 LCN6P62502 163 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 PIGFQ07326 219 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 HSPB2Q16082 182 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF684Q5T5D7 378 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SHFQ7M4L6 423 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SYT14Q8NB59 555 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR13F1Q8NGS4 319 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 MBD3L2Q8NHZ7 208 aaPredicted RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 FAM57AQ8TBR7 257 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 CPT1CQ8TCG5 803 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SNRNP40Q96DI7 357 aaKnown RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZMYND19Q96E35 227 aaPredicted RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 MRPL48Q96GC5 212 aaKnown RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 INTS14Q96SY0 518 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 PRRG4Q9BZD6 226 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 CCDC90BQ9GZT6 254 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 WDR76Q9H967 626 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 B3GAT2Q9NPZ5 323 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 NOSIPQ9Y314 301 aaKnown RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 KIAA1549Q9HCM3 1950 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 PRRC2CQ9Y520 2896 aaKnown RBP12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 IGKV1D-43A0A0B4J1Z2 117 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 C12orf71A8MTZ7 269 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF99A8MXY4 864 aaPredicted RBP12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 DHHO43323 396 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 TGM6O95932 706 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 TFP02787 698 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 QDPRP09417 244 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 EDN3P14138 238 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 ALOX5APP20292 161 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 AGTR1P30556 359 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 PYCR1P32322 319 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 ETV1P50549 477 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 WNT4P56705 351 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 ACTA2P62736 377 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 ACTG2P63267 376 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 MRPS34P82930 218 aaKnown RBP12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 ROM1Q03395 351 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 TLE1Q04724 770 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 EGR3Q06889 387 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 MRPL28Q13084 256 aaKnown RBP12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 SPHARQ15513 63 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 CDONQ4KMG0 1287 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 DEGS2Q6QHC5 323 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 TMPRSS11AQ6ZMR5 421 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 MCEMP1Q8IX19 187 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 TUSC5Q8IXB3 177 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR6K6Q8NGW6 343 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR6N1Q8NGY5 312 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 OTOSQ8NHW6 89 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 ASB17Q8WXJ9 295 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 RORBQ92753 470 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 FAM192AQ9GZU8 254 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 MRPL22Q9NWU5 206 aaKnown RBP12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 COA3Q9Y2R0 106 aaPredicted RBP12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 UGT2A1Q9Y4X1 527 aa12.61□□□□□ -0.39
SHMT1P1-201ENST00000419974 MED12Q93074 2177 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 A0A1W2PQL4 384 aaPredicted RBP12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 DAPL1A0PJW8 107 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF701M0R085 212 aaPredicted RBP12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 SULT1C4O75897 302 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 PTHP01270 115 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 NPR2P20594 1047 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 ENTPD1P49961 510 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF85Q03923 595 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 MLLT11Q13015 90 aaPredicted RBP12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 GPR50Q13585 617 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 ETFDHQ16134 617 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 C3AR1Q16581 482 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF322Q6U7Q0 402 aaPredicted RBP12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 FAM214BQ7L5A3 538 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 SLC35F2Q8IXU6 374 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 KLHL36Q8N4N3 616 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 CISD2Q8N5K1 135 aaKnown RBP12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR51L1Q8NGJ5 315 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 SLCO5A1Q9H2Y9 848 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 MALT1Q9UDY8 824 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 CLEC2DQ9UHP7 191 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 CYB5R1Q9UHQ9 305 aa12.6□□□□□ -0.39
SHMT1P1-201ENST00000419974 ARPC4-TTLL3A0A0A6YYG9 625 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 MYL12BO14950 172 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 TMCC2O75069 709 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 SCG5P05408 212 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 CD1AP06126 327 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 CD53P19397 219 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR3A2P47893 321 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 GP2P55259 537 aaKnown RBP12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 FMODQ06828 376 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 FAM27BQ5VT28 67 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms