RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 HIKESHIQ53FT3 197 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 FBLN7Q53RD9 439 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 DEF8Q6ZN54 512 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 LINGO2Q7L985 606 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ABHD12BQ7Z5M8 362 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 CPLX4Q7Z7G2 160 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 TGIF2LYQ8IUE0 185 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 UEVLDQ8IX04 471 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 SLC15A3Q8IY34 581 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF611Q8N823 705 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 WDR31Q8NA23 367 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 OR1K1Q8NGR3 316 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 LILRB1Q8NHL6 650 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 IGFBPL1Q8WX77 278 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 NEUROG1Q92886 237 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 PIGTQ969N2 578 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 SPSB4Q96A44 273 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 CMTM5Q96DZ9 223 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 TPD52L3Q96J77 140 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 MPP4Q96JB8 637 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 PIP5K1AQ99755 562 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 HOPXQ9BPY8 73 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 PRSS27Q9BQR3 290 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF426Q9BUY5 554 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 LINC00470Q9BZP3 86 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 SLC19A3Q9BZV2 496 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 EFCAB1Q9HAE3 211 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 AKIP1Q9NQ31 210 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 SLC17A5Q9NRA2 495 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 AURKAIP1Q9NWT8 199 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 MRPL39Q9NYK5 338 aaKnown RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ABCD2Q9UBJ2 740 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 AMDHD2Q9Y303 409 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 MED13LQ71F56 2210 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 DSCAMO60469 2012 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 USF3Q68DE3 2245 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 SHISA9B4DS77 424 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 CXCR6O00574 342 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 PLPP3O14495 311 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 NDUFAB1O14561 156 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 ABCD4O14678 606 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 AKAP8O43823 692 aaKnown RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 SERPINI2O75830 405 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 ZFPL1O95159 310 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 OR5F1O95221 314 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 CH25HO95992 272 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 AHCYP23526 432 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 PRDX6P30041 224 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 OR1E2P47887 323 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 GSK3BP49841 420 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 CDH11P55287 796 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 PRPS1P60891 318 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 SELENOWP63302 87 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 ROR2Q01974 943 aaKnown RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 SPOCK1Q08629 439 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 FOXD4Q12950 439 aaPredicted RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 TBRG1Q3YBR2 411 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF672Q499Z4 452 aaPredicted RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 PLA1AQ53H76 456 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 Q5PR19 223 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 HMBOX1Q6NT76 420 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 TTC33Q6PID6 262 aaPredicted RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 KLHL17Q6TDP4 642 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 KLHL24Q6TFL4 600 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM108Q6UXF1 575 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 NHLRC1Q6VVB1 395 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 SLC46A3Q7Z3Q1 461 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 NKAIN4Q8IVV8 208 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 WDFY1Q8IWB7 410 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM123Q8N131 208 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 LRRC75A-AS1Q8N1F1 130 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 WFDC11Q8NEX6 87 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 OR5J2Q8NH18 312 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 IL17DQ8TAD2 202 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM255BQ8WV15 326 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM171Q8WVE6 324 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 LZICQ8WZA0 190 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 PERPQ96FX8 193 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 BOD1Q96IK1 185 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 PRRC1Q96M27 445 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 OR2M2Q96R28 347 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 KCTD14Q9BQ13 255 aaPredicted RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 C1QTNF6Q9BXI9 259 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 POLR2J2Q9GZM3 115 aaKnown RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 POLR2J3Q9H1A7 115 aaKnown RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 FKRPQ9H9S5 495 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 SPAG4Q9NPE6 437 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 OBP2BQ9NPH6 170 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 MEPEQ9NQ76 525 aaPredicted RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 TBC1D23Q9NUY8 699 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 MED29Q9NX70 200 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 RIMS3Q9UJD0 308 aa6.03□□□□□ -1.44
HMGN1-205ENST00000419378 MAGED1Q9Y5V3 778 aaPredicted RBP6.03□□□□□ -1.44
HMGN1-205ENST00000419378 SETD2Q9BYW2 2564 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 NF1P21359 2839 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ALPK2Q86TB3 2170 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 C11orf98E9PRG8 122 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 RPL36A-HNRNPH2H7BZ11 118 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 M0R1B8 84 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 M0R3G1 203 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms