RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 MOGQ16653 247 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 TTMPQ5BVD1 217 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 PABPC1L2AQ5JQF8 200 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 ARMC4Q5T2S8 1044 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 OR1J1Q8NGS3 322 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 MOSPD2Q8NHP6 518 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 TMEM255BQ8WV15 326 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 DYDC1Q8WWB3 177 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 RASSF5Q8WWW0 418 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 NMD3Q96D46 503 aaKnown RBP12.61□□□□□ -0.39
RPS28-201ENST00000417088 TMPRSS13Q9BYE2 586 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 SIAEQ9HAT2 523 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 C20orf141Q9NUB4 165 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 DECR2Q9NUI1 292 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 PCDHB10Q9UN67 800 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 SH3GLB1Q9Y371 365 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 WIPI2Q9Y4P8 454 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 UGT2A1Q9Y4X1 527 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 IGKV1D-43A0A0B4J1Z2 117 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 TPD52L2O43399 206 aaKnown RBP12.6□□□□□ -0.39
RPS28-201ENST00000417088 IGHV2-5P01817 119 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 TSPAN19P0C672 248 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 TNFRSF1BP20333 461 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 DRD4P21917 467 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 CCNOP22674 350 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 STOMP27105 288 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 WNT5AP41221 380 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 RBM34P42696 430 aaKnown RBP12.6□□□□□ -0.39
RPS28-201ENST00000417088 COMPP49747 757 aaPredicted RBP12.6□□□□□ -0.39
RPS28-201ENST00000417088 DAP3P51398 398 aaKnown RBP12.6□□□□□ -0.39
RPS28-201ENST00000417088 ZNF81P51508 661 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 MMP15P51511 669 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 HILS1P60008 231 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 ACTG1P63261 375 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 TSTQ16762 297 aaKnown RBP12.6□□□□□ -0.39
RPS28-201ENST00000417088 TMEM255AQ5JRV8 349 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 NANOGP8Q6NSW7 305 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 USP43Q70EL4 1123 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 HDDC2Q7Z4H3 204 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 ZNF101Q8IZC7 436 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 LIPHQ8WWY8 451 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 NABP1Q96AH0 204 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 RAB39BQ96DA2 213 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 SGTBQ96EQ0 304 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 POM121L2Q96KW2 1035 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 SAP30LQ9HAJ7 183 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 CCNB1IP1Q9NPC3 277 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 RIMS3Q9UJD0 308 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 DYSFO75923 2080 aa12.6□□□□□ -0.39
RPS28-201ENST00000417088 LOC100509620A0A075B734 347 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 TMEM89A2RUT3 159 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 CLDN25C9JDP6 229 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 FBP2O00757 339 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 IGF2P01344 180 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 MT-ND5P03915 603 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
RPS28-201ENST00000417088 ZNF32P17041 273 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 MAKP20794 623 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 MPV17P39210 176 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 ARFIP2P53365 341 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 PIN1Q13526 163 aaPredicted RBP12.59□□□□□ -0.39
RPS28-201ENST00000417088 LAPTM4AQ15012 233 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 SGCAQ16586 387 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 HFEQ30201 348 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 ZNF718Q3SXZ3 478 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 RABL3Q5HYI8 236 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 SPATA46Q5T0L3 261 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 C1QL2Q7Z5L3 287 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 PEG10Q86TG7 708 aaKnown RBP12.59□□□□□ -0.39
RPS28-201ENST00000417088 CALHM3Q86XJ0 350 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 TEX29Q8N6K0 151 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 FAM216AQ8WUB2 273 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 TMEM239Q8WW34 195 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 HDAC2Q92769 488 aaKnown RBP12.59□□□□□ -0.39
RPS28-201ENST00000417088 RAB1CQ92928 201 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 MARS2Q96GW9 593 aaKnown RBP12.59□□□□□ -0.39
RPS28-201ENST00000417088 KCNN2Q9H2S1 579 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 SMURF2Q9HAU4 748 aa12.59□□□□□ -0.39
RPS28-201ENST00000417088 INTS9Q9NV88 658 aaKnown RBP12.59□□□□□ -0.39
RPS28-201ENST00000417088 A0A0G2JMP0 313 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 A0A0X1KG70 313 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 C5orf49A4QMS7 147 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 NPIPB13A6NJU9 1138 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 NPIPB4C9JG80 1138 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 TRIM77I1YAP6 450 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 J3QLI3 93 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 SPRY3O43610 288 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 SHOX2O60902 331 aaPredicted RBP12.58□□□□□ -0.4
RPS28-201ENST00000417088 OR5F1O95221 314 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 IGHV1-46P01743 117 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 GCH1P30793 250 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 TAS2R41P59536 307 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 PSG4Q00888 419 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 FMODQ06828 376 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 FAM209AQ5JX71 171 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 THEM4Q5T1C6 240 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 SLC25A47Q6Q0C1 308 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 OR4M2Q8NGB6 313 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 AKR7LQ8NHP1 331 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms