RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 TRBV4-1A0A0J9YWV2 114 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 H7C1C5 153 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 H7C417 338 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 ARPC2O15144 300 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 GPRIN2O60269 458 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 GMNNO75496 209 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 UBL3O95164 117 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 IGLV1-40P01703 118 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 H1F0P07305 194 aaKnown RBP8.29□□□□□ -1.08
LINC01090-201ENST00000415357 OR8G3PP0DMU2 310 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 HSD17B1P14061 328 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 ZNF26P17031 533 aaPredicted RBP8.29□□□□□ -1.08
LINC01090-201ENST00000415357 PAX7P23759 505 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 CDAP32320 146 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 SERPINF1P36955 418 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 ZNF84P51523 738 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 SNRPD2P62316 118 aaKnown RBP8.29□□□□□ -1.08
LINC01090-201ENST00000415357 LCN6P62502 163 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 ERVK-25P63136 954 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 CHRNB3Q05901 458 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 KRTAP1-1Q07627 177 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 DAG1Q14118 895 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 SEC23BQ15437 767 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 FXNQ16595 210 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 SAMD4BQ5PRF9 694 aaKnown RBP8.29□□□□□ -1.08
LINC01090-201ENST00000415357 PODNL1Q6PEZ8 512 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 PIWIL3Q7Z3Z3 882 aaKnown RBP8.29□□□□□ -1.08
LINC01090-201ENST00000415357 OAFQ86UD1 273 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 ZNF584Q8IVC4 421 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 SVOPLQ8N434 492 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 LRRC18Q8N456 261 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 ANKS4BQ8N8V4 417 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 NUP37Q8NFH4 326 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 OR4F15Q8NGB8 312 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 OR52J3Q8NH60 311 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 NSMAFQ92636 917 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 NMD3Q96D46 503 aaKnown RBP8.29□□□□□ -1.08
LINC01090-201ENST00000415357 NSMCE2Q96MF7 247 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 SORCS2Q96PQ0 1159 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 REG4Q9BYZ8 158 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 TXNIPQ9H3M7 391 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 GORASP2Q9H8Y8 452 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 CD300AQ9UGN4 299 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 MAGEL2Q9UJ55 1249 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 ADAM18Q9Y3Q7 739 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 UGT2A1Q9Y4X1 527 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 PMF1-BGLAPU3KQ54 211 aa8.29□□□□□ -1.08
LINC01090-201ENST00000415357 NSD1Q96L73 2696 aaPredicted RBP8.29□□□□□ -1.08
LINC01090-201ENST00000415357 NPIPB13A6NJU9 1138 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 NPIPB4C9JG80 1138 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 GSC2O15499 205 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 PDE5AO76074 875 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 IGHMP01871 453 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 SEMG1P04279 462 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 CCL2P13500 99 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 ZNF35P13682 527 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 RHCEP18577 417 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 NPR2P20594 1047 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 SLC9A3P48764 834 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 ZNF133P52736 654 aaPredicted RBP8.28□□□□□ -1.08
LINC01090-201ENST00000415357 RPL27P61353 136 aaKnown RBP8.28□□□□□ -1.08
LINC01090-201ENST00000415357 KRT72Q14CN4 511 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 IQCCQ4KMZ1 466 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 C10orf128Q5T292 105 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 SLC25A47Q6Q0C1 308 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 CLEC2AQ6UVW9 174 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 C16orf89Q6UX73 402 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 TMPRSS11FQ6ZWK6 438 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 SLC16A14Q7RTX9 510 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 HDDC2Q7Z4H3 204 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 CDK20Q8IZL9 346 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 RNF113BQ8IZP6 322 aaKnown RBP8.28□□□□□ -1.08
LINC01090-201ENST00000415357 ZCCHC24Q8N2G6 241 aaKnown RBP8.28□□□□□ -1.08
LINC01090-201ENST00000415357 PAQR4Q8N4S7 273 aaPredicted RBP8.28□□□□□ -1.08
LINC01090-201ENST00000415357 ZNF519Q8TB69 540 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 NABP1Q96AH0 204 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 PYURFQ96I23 114 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 Q96M85 177 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 GPA33Q99795 319 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 VRK1Q99986 396 aaPredicted RBP8.28□□□□□ -1.08
LINC01090-201ENST00000415357 OR51B6Q9H340 312 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 ANKRD19PQ9H560 264 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 ZNF442Q9H7R0 627 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 RNF121Q9H920 327 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 IL20RAQ9UHF4 553 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 FZR1Q9UM11 496 aa8.28□□□□□ -1.08
LINC01090-201ENST00000415357 FAM32AQ9Y421 112 aaKnown RBP8.28□□□□□ -1.08
LINC01090-201ENST00000415357 CR1P17927 2039 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 ARFGEF3Q5TH69 2177 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 ANK3Q12955 4377 aaKnown RBP8.27□□□□□ -1.09
LINC01090-201ENST00000415357 A0A1W2PRQ8 180 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 TMEM129A0AVI4 362 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 SH3PXD2BA1X283 911 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 HTR3EA5X5Y0 456 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 B2RBV5 119 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 CENPBD1B2RD01 187 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 B9A039 149 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 IMPA2O14732 288 aa8.27□□□□□ -1.09
LINC01090-201ENST00000415357 FARS2O95363 451 aaKnown RBP8.27□□□□□ -1.09
LINC01090-201ENST00000415357 FAM107AO95990 144 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms