RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ITGB2P05107 769 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 RAP2BP61225 183 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 SHHQ15465 462 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 FDX2Q6P4F2 183 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 FBXO46Q6PJ61 603 aaPredicted RBP8.88□□□□□ -0.99
SS18-203ENST00000415083 IQCF2Q8IXL9 164 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 OR6N1Q8NGY5 312 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 GPX8Q8TED1 209 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 ZNF721Q8TF20 911 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 DCBLD2Q96PD2 775 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 B3GNT4Q9C0J1 378 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 LAMP5Q9UJQ1 280 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 B9D1Q9UPM9 204 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 OR10H1Q9Y4A9 318 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 HS3ST3A1Q9Y663 406 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 A0A1W2PPC1 479 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 C17orf105B2RV13 164 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 B4DGG1 531 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 GOSR2O14653 212 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 LDOC1O95751 146 aaPredicted RBP8.88□□□□□ -0.99
SS18-203ENST00000415083 CTLA4P16410 223 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 CCR4P51679 360 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 ARHGDIBP52566 201 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 TAF8Q7Z7C8 310 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 PARGQ86W56 976 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 OR52H1Q8NGJ2 320 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 OR6M1Q8NGM8 313 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 OR1J4Q8NGS1 313 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 ASB5Q8WWX0 329 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 SEH1LQ96EE3 360 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 MMABQ96EY8 250 aaPredicted RBP8.88□□□□□ -0.99
SS18-203ENST00000415083 BARX1Q9HBU1 254 aaPredicted RBP8.88□□□□□ -0.99
SS18-203ENST00000415083 DZANK1Q9NVP4 752 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 IKZF2Q9UKS7 526 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 SLC5A6Q9Y289 635 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 ASXL3Q9C0F0 2248 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 CEP290O15078 2479 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 KIR2DS5A0A0G2JLQ3 304 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 A0A0G2JNG1 304 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 H3BUI4 141 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 KIR2DS3K7RE56 304 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 L7N2F9 121 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 ZNF264O43296 627 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 NPIPB7O75200 414 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 RLN2P04090 185 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 FGF2P09038 288 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 NAGAP17050 411 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 ZP3P21754 424 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 EGR3Q06889 387 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 SLC17A1Q14916 467 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 KIR2DS5Q14953 304 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 SLC22A6Q4U2R8 563 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 OR10K2Q6IF99 312 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 CFAP77Q6ZQR2 320 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 C17orf107Q6ZR85 190 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 KCTD20Q7Z5Y7 419 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 MARCH3Q86UD3 253 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 OOSP2Q86WS3 158 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 C9orf40Q8IXQ3 194 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 OR8B4Q96RC9 309 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 ADOQ96SZ5 270 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 TINAGL1Q9GZM7 467 aaPredicted RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 ELOVL3Q9HB03 270 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 MYEF2Q9P2K5 600 aaKnown RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 FBXO4Q9UKT5 387 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 TRAV18A0A075B6X5 111 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 IGKV3D-11A0A0A0MRZ8 115 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 HMSDA8MTL9 139 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 C11orf98E9PRG8 122 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 SEMA4FO95754 770 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 CD1CP29017 333 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 S100A11P31949 105 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 GRK6P43250 576 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 POMZP3Q6PJE2 187 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 Q6ZS52 159 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 C10orf53Q8N6V4 93 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 OR8S1Q8NH09 359 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 ZMAT3Q9HA38 289 aaKnown RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 UBQLN4Q9NRR5 601 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 RABL2AQ9UBK7 228 aaPredicted RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 GRHPRQ9UBQ7 328 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 EPHA6Q9UF33 1036 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 RABL2BQ9UNT1 228 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 M0QYG6 137 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 ZNF354AO60765 605 aaPredicted RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 MRPS10P82664 201 aaKnown RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 RBMS2Q15434 407 aaKnown RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 MEIOBQ8N635 442 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 OR13C8Q8NGS7 320 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 FAM3DQ96BQ1 224 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 INTS14Q96SY0 518 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 NUDT9Q9BW91 350 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 NKX2-4Q9H2Z4 354 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 FN3KRPQ9HA64 309 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 FBRSQ9HAH7 460 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 ZC4H2Q9NQZ6 224 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 MED9Q9NWA0 146 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
SS18-203ENST00000415083 CGGBP1Q9UFW8 167 aaPredicted RBP8.87□□□□□ -0.99
SS18-203ENST00000415083 KLK13Q9UKR3 277 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms