RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 B3GNT2Q9NY97 397 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TAS2R9Q9NYW1 312 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CACNG5Q9UF02 275 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF6Q9Y252 685 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 KLF2Q9Y5W3 355 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 SPIN1Q9Y657 262 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 AUP1Q9Y679 476 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 MICAL3Q7RTP6 2002 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 UBR3Q6ZT12 1888 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 COL4A4P53420 1690 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 THSD7AQ9UPZ6 1657 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 IGHV4-4A0A075B6R2 117 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TRAV26-1A0A087WT03 109 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 A0A096LPI6 279 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 IQCMA0A1B0GVH7 501 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATP6AP2A0A1C7CYW4 349 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 LINC00862A6NCI5 91 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ARRDC5A6NEK1 342 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 EFCAB10A6NFE3 127 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 WASHC1A8K0Z3 465 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 KRTAP16-1A8MUX0 517 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMX2-CTNND1H3BSU7 103 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 KCNK1O00180 336 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC28A1O00337 649 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ITGB1BP1O14713 200 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 DUX1O43812 170 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TPST1O60507 370 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 GRAP2O75791 330 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 AHSA1O95433 338 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 NSA2O95478 260 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CLIC3O95833 236 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TSPAN12O95859 305 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 JCHAINP01591 159 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 HLA-DQB1P01920 261 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 C1QBP02746 253 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 FTH1P02794 183 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAF1P04049 648 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CDK1P06493 297 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CRYGBP07316 175 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 MMP10P09238 476 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CD3GP09693 182 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PIPP12273 146 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 KCNE1P15382 129 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CD1EP15812 388 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CD1DP15813 335 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TNNI3P19429 210 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 UQCRC2P22695 453 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PPIBP23284 216 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PSMB9P28065 219 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 HTR2AP28223 471 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 IFNA8P32881 189 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 HMGCLP35914 325 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TGFBR2P37173 567 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 YAP1P46937 504 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR3A3P47888 321 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CSNK1DP48730 415 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCT3P49368 545 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB9AP51151 201 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 EMP2P54851 167 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 BACE1P56817 501 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACTBP60709 375 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACTA2P62736 377 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 POLR2LP62875 67 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACTG1P63261 375 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACTG2P63267 376 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACTC1P68032 377 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACTA1P68133 377 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 SIRPAP78324 504 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 IL5RAQ01344 420 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CD300CQ08708 224 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PNRC1Q12796 327 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 EIF4EBP2Q13542 120 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 DGCR6Q14129 220 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 MAD2L1BPQ15013 274 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 KIAA0040Q15053 153 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 EXT1Q16394 746 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 IMPG1Q17R60 797 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PARP15Q460N3 678 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCDC58Q4VC31 144 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATP6AP1LQ52LC2 224 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PAGE3Q5JUK9 113 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 DCAF10Q5QP82 559 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CELF3Q5SZQ8 465 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 MARCH8Q5T0T0 291 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PDZK1Q5T2W1 519 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 HACD4Q5VWC8 232 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAET1LQ5VY80 246 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR2T5Q6IEZ7 315 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAHD1Q6P587 224 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ALKAL1Q6UXT8 129 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 WASH2PQ6VEQ5 465 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 GDPD3Q7L5L3 318 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC16A9Q7RTY1 509 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PIGZQ86VD9 579 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PAQR7Q86WK9 346 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CALHM3Q86XJ0 350 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 MFSD6LQ8IWD5 586 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RDH10Q8IZV5 341 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 APCDD1Q8J025 514 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms