RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 FBXO9Q9UK97 447 aaPredicted RBP12.76□□□□□ -0.37
LIMS1-206ENST00000414829 SPEF1Q9Y4P9 236 aa12.76□□□□□ -0.37
LIMS1-206ENST00000414829 CELSR2Q9HCU4 2923 aa12.76□□□□□ -0.37
LIMS1-206ENST00000414829 IQCMA0A1B0GVH7 501 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 A0A1W2PPL8 197 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 RIIAD1A6NNX1 92 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 H3BN98 237 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 BHLHE40O14503 412 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 CECR9P0C854 216 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 BMP4P12644 408 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 ZNF3P17036 446 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 RAB1AP62820 205 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 NAAAQ02083 359 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 HSF2Q03933 536 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 PPP1R8Q12972 351 aaKnown RBP12.75□□□□□ -0.37
LIMS1-206ENST00000414829 FREM1Q5H8C1 2179 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 FAM27BQ5VT28 67 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 UNQ6126/PRO20091Q6UXV3 157 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 OR1J2Q8NGS2 313 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 TSSK6Q9BXA6 273 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 C1QTNF6Q9BXI9 259 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 RACGAP1Q9H0H5 632 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 EGLN3Q9H6Z9 239 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 SEC61A2Q9H9S3 476 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 UGT2A1Q9Y4X1 527 aa12.75□□□□□ -0.37
LIMS1-206ENST00000414829 CENPEQ02224 2701 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 ABCA12Q86UK0 2595 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 NBPF19A0A087WUL8 3843 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SHISA9B4DS77 424 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 G3V2T6 193 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 H7C1C5 153 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SLC16A7O60669 478 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 ATE1O95260 518 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SOX14O95416 240 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SERPINA5P05154 406 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 CST2P09228 141 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 OSMP13725 252 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 HIST1H1CP16403 213 aaKnown RBP12.74□□□□□ -0.37
LIMS1-206ENST00000414829 ZNF23P17027 643 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 PAICSP22234 425 aaKnown RBP12.74□□□□□ -0.37
LIMS1-206ENST00000414829 LAP3P28838 519 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 GIPRP48546 466 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 IST1P53990 364 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 RPS23P62266 143 aaKnown RBP12.74□□□□□ -0.37
LIMS1-206ENST00000414829 LCN6P62502 163 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 TUBA1BP68363 451 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 TUBA4AP68366 448 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 GALK2Q01415 458 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SCRN3Q0VDG4 424 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 KPNB1Q14974 876 aaKnown RBP12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SGCAQ16586 387 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 AGAP6Q5VW22 663 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SLC27A4Q6P1M0 643 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 TUBA1AQ71U36 451 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SKA3Q8IX90 412 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 ALDH16A1Q8IZ83 802 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 PARP8Q8N3A8 854 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 NUP37Q8NFH4 326 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 OR2T4Q8NH00 348 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 TMEM171Q8WVE6 324 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 STMN2Q93045 179 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 CENPNQ96H22 339 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-206ENST00000414829 SH3GL3Q99963 347 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 NIPSNAP1Q9BPW8 284 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 GRIP2Q9C0E4 1043 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 POLE4Q9NR33 117 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 PAPOLBQ9NRJ5 636 aaKnown RBP12.74□□□□□ -0.37
LIMS1-206ENST00000414829 CISD1Q9NZ45 108 aaKnown RBP12.74□□□□□ -0.37
LIMS1-206ENST00000414829 PLEKHA6Q9Y2H5 1048 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 POLR1DQ9Y2S0 133 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 FKBP7Q9Y680 259 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 FBN2P35556 2912 aa12.74□□□□□ -0.37
LIMS1-206ENST00000414829 NAV2Q8IVL1 2488 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 A0A1W2PPR1 153 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 CTLA4P16410 223 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-206ENST00000414829 CDAP32320 146 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 GRK5P34947 590 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 CENPAP49450 140 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 BLVRAP53004 296 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 LSM6P62312 80 aaKnown RBP12.73□□□□□ -0.37
LIMS1-206ENST00000414829 AQP6Q13520 282 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 TBC1D28Q2M2D7 210 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 PGGHGQ32M88 737 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 SLC36A3Q495N2 470 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 FBXL14Q8N1E6 418 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 OR52E2Q8NGJ4 325 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 OR4K13Q8NH42 304 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 SMAP2Q8WU79 429 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-206ENST00000414829 NABP1Q96AH0 204 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 DHRS9Q9BPW9 319 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 NUAK2Q9H093 628 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 GABARAPL1Q9H0R8 117 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 KCNG2Q9UJ96 466 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 MOKQ9UQ07 419 aa12.73□□□□□ -0.37
LIMS1-206ENST00000414829 TIMM10BQ9Y5J6 103 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms