RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ETFDHQ16134 617 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 PGBD2Q6P3X8 592 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 UNQ6126/PRO20091Q6UXV3 157 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 DTX2Q86UW9 622 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 NUP37Q8NFH4 326 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 TRAF4Q9BUZ4 470 aaPredicted RBP12.78□□□□□ -0.36
CHD1-202ENST00000414220 BARX1Q9HBU1 254 aaPredicted RBP12.78□□□□□ -0.36
CHD1-202ENST00000414220 CA10Q9NS85 328 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 ZNF701Q9NV72 531 aaPredicted RBP12.78□□□□□ -0.36
CHD1-202ENST00000414220 IL20RAQ9UHF4 553 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 TACC2O95359 2948 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 C12orf71A8MTZ7 269 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 EBAG9O00559 213 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 SOCS2O14508 198 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 ARPC3O15145 178 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 PPP1R3DO95685 299 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 TXNDC12O95881 172 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 CST2P09228 141 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 MSR1P21757 451 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 APLNRP35414 380 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 SERPINF1P36955 418 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 SNRPD2P62316 118 aaKnown RBP12.77□□□□□ -0.37
CHD1-202ENST00000414220 COX10Q12887 443 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 DAG1Q14118 895 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 RAB39AQ14964 217 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 TBC1D28Q2M2D7 210 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 MESTQ5EB52 335 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 Q5PR19 223 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 FAM27BQ5VT28 67 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 C1orf146Q5VVC0 180 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 VHLLQ6RSH7 139 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 RASSF6Q6ZTQ3 369 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 FAM122BQ7Z309 247 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 TGIF2LYQ8IUE0 185 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 AQP11Q8NBQ7 271 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 OR4C15Q8NGM1 316 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 GIPC3Q8TF64 312 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 NMD3Q96D46 503 aaKnown RBP12.77□□□□□ -0.37
CHD1-202ENST00000414220 SAMD8Q96LT4 415 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 GPA33Q99795 319 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 RERGLQ9H628 205 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 ZNF556Q9HAH1 456 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 CDH20Q9HBT6 801 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 BAIAP2Q9UQB8 552 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 CDH10Q9Y6N8 788 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 POLQO75417 2590 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 PDZD2O15018 2839 aa12.77□□□□□ -0.37
CHD1-202ENST00000414220 LRBAP50851 2863 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 IGHV2OR16-5A0A0B4J2B6 119 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 B9A039 149 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 H7C1C5 153 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 SLC16A7O60669 478 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 FKBP6O75344 327 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 GASTP01350 101 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 CELA3BP08861 270 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 PATE4P0C8F1 98 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 ZNF14P17017 642 aaPredicted RBP12.76□□□□□ -0.37
CHD1-202ENST00000414220 CDAP32320 146 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 CENPAP49450 140 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 SELENOVP59797 346 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 LCN6P62502 163 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 CBX1P83916 185 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 RAB35Q15286 201 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 SYT9Q86SS6 491 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 SLC30A7Q8NEW0 376 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 OR9Q2Q8NGE9 314 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 RASD2Q96D21 266 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 FBXO17Q96EF6 278 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 SNX18Q96RF0 628 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 ZNF442Q9H7R0 627 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 DNAJB9Q9UBS3 223 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 CMAHPQ9Y471 501 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 TIMM10BQ9Y5J6 103 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 AKAP6Q13023 2319 aa12.76□□□□□ -0.37
CHD1-202ENST00000414220 TCRBV3S1A0A5B6 114 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 ARRDC5A6NEK1 342 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 OVOL3O00110 214 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 DEAF1O75398 565 aaPredicted RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 ERCC1P07992 297 aaPredicted RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 CD99P14209 185 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 ZNF26P17031 533 aaPredicted RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 NR4A1P22736 598 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 LAP3P28838 519 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 CALCRP30988 508 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 RAD52P43351 418 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 ADAM8P78325 824 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 SCRN3Q0VDG4 424 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 PPP1R8Q12972 351 aaKnown RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 SNTB2Q13425 540 aaKnown RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 FOXL2NBQ6ZUU3 175 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms