RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 MRPL24Q96A35 216 aaKnown RBP13.55□□□□□ -0.24
MCF2L-211ENST00000413354 PYURFQ96I23 114 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 C7orf34Q96L11 122 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 TSPAN32Q96QS1 320 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 TNFRSF13CQ96RJ3 184 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 CCT8L2Q96SF2 557 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 CDRT15Q96T59 188 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 PIMREGQ9BSJ6 248 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 GRHPRQ9UBQ7 328 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 CD300AQ9UGN4 299 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 ZNF346Q9UL40 294 aaKnown RBP13.55□□□□□ -0.24
MCF2L-211ENST00000413354 RTTNQ86VV8 2226 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 XKRYO14609 159 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 CDC42EP2O14613 210 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 ARPC2O15144 300 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 AHCYL1O43865 530 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 CD14P08571 375 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 FMODQ06828 376 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 LOXL1Q08397 574 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-211ENST00000413354 FHL1Q13642 323 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 SLC25A47Q6Q0C1 308 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 TSEN54Q7Z6J9 526 aaKnown RBP13.54□□□□□ -0.24
MCF2L-211ENST00000413354 MEX3DQ86XN8 651 aaKnown RBP13.54□□□□□ -0.24
MCF2L-211ENST00000413354 ZNF584Q8IVC4 421 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 LRRC18Q8N456 261 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 FAM86B1Q8N7N1 296 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 ARIH2OSQ8N7S6 290 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 NEU4Q8WWR8 484 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-211ENST00000413354 NSMAFQ92636 917 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 FAM46AQ96IP4 442 aaKnown RBP13.54□□□□□ -0.24
MCF2L-211ENST00000413354 DHRS1Q96LJ7 313 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 DOK1Q99704 481 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 AURKCQ9UQB9 309 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 UGT2A1Q9Y4X1 527 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 V9GYQ6 96 aa13.54□□□□□ -0.24
MCF2L-211ENST00000413354 M0R233 179 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 SYNGR3O43761 229 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 TLX2O43763 284 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-211ENST00000413354 CD5LO43866 347 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 GPRIN2O60269 458 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 NDUFB2O95178 105 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 SNAP29O95721 258 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 FAM107AO95990 144 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 MMP7P09237 267 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-211ENST00000413354 PCSK6P29122 969 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 CDAP32320 146 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 APLNRP35414 380 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 SELENOVP59797 346 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 PCBD1P61457 104 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 ERVK-25P63136 954 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 SPIBQ01892 262 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 KRTAP1-1Q07627 177 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 RGS7BPQ6MZT1 257 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-211ENST00000413354 ARHGAP24Q8N264 748 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 NABP1Q96AH0 204 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
MCF2L-211ENST00000413354 ZNF570Q96NI8 536 aa13.53□□□□□ -0.24
MCF2L-211ENST00000413354 MRPL37Q9BZE1 423 aaKnown RBP13.53□□□□□ -0.24
MCF2L-211ENST00000413354 SONP18583 2426 aaKnown RBP13.53□□□□□ -0.24
MCF2L-211ENST00000413354 A0A096LNT2 108 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 IGKV1D-43A0A0B4J1Z2 117 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 TRBV4-1A0A0J9YWV2 114 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 LOC390937A0A1W2PQ73 354 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 TMEM129A0AVI4 362 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 INAFM1C9JVW0 142 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 LY6HO94772 140 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 DIRAS1O95057 198 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 SEMG1P04279 462 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 FABP3P05413 133 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 CST2P09228 141 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 OMPP47874 163 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 LIMS1P48059 325 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 CARTPTQ16568 116 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 SGCAQ16586 387 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 MTX3Q5HYI7 312 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 FAM27BQ5VT28 67 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 GPR139Q6DWJ6 353 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 UNQ6126/PRO20091Q6UXV3 157 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 FOXL2NBQ6ZUU3 175 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 ZNF540Q8NDQ6 660 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 OR52J3Q8NH60 311 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 GPX7Q96SL4 187 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-211ENST00000413354 WACQ9BTA9 647 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 BCL2L14Q9BZR8 327 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 MUC13Q9H3R2 512 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 GPR160Q9UJ42 338 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 SIGLEC7Q9Y286 467 aa13.52□□□□□ -0.25
MCF2L-211ENST00000413354 A0A1W2PPL8 197 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 SH3PXD2BA1X283 911 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 UNC119BA6NIH7 251 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 GADD45GO95257 159 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 ZNF32P17041 273 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 MSR1P21757 451 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 USF1P22415 310 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-211ENST00000413354 SDHAP31040 664 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 IFNGR2P38484 337 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 RAD52P43351 418 aa13.51□□□□□ -0.25
MCF2L-211ENST00000413354 KRR1Q13601 381 aaKnown RBP13.51□□□□□ -0.25
MCF2L-211ENST00000413354 TMEM249Q2WGJ8 235 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms