RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TRAPPC4Q9Y296 219 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 ARHGAP23Q9P227 1491 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 ARPC4-TTLL3A0A0A6YYG9 625 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 XKRYO14609 159 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 UTS2O95399 124 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 TDGF1P13385 188 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 TUBG1P23258 451 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 NUDT1P36639 197 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 TDGF1P3P51864 188 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 CLDN8P56748 225 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 DAZ2Q13117 558 aaKnown RBP3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 TRAM2Q15035 370 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 GUCA2BQ16661 112 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 HIKESHIQ53FT3 197 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 CCNJQ5T5M9 372 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 MBOAT1Q6ZNC8 495 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF621Q6ZSS3 439 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 TMEM179Q6ZVK1 233 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 OAFQ86UD1 273 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 SPAG16Q8N0X2 631 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 MREGQ8N565 214 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 GLYATL2Q8WU03 294 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 EEF1AKMT3Q96AZ1 226 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 FAM3DQ96BQ1 224 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 SLC7A5P2Q9GIP4 190 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 BLZF1Q9H2G9 400 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 DAZ3Q9NR90 486 aaKnown RBP3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 TUBG2Q9NRH3 451 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF225Q9UK10 706 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 CEMIPQ8WUJ3 1361 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 AKNAQ7Z591 1439 aa3.32□□□□□ -1.88
HMGB3P31-201ENST00000413333 UBN2Q6ZU65 1347 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 A0A1B0GW55 424 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 PRSS37A4D1T9 235 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 M0R3G1 203 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 KMOO15229 486 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 CLDN11O75508 207 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 IGHV4-34P06331 123 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 UBCP0CG48 685 aaKnown RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4L2P0CJ85 424 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4L3P0CJ86 424 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4L4P0CJ87 422 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4L5P0CJ88 424 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4L6P0CJ89 424 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4L7P0CJ90 424 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 IGHV3-43DP0DP04 118 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 HRH1P35367 487 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 NCBP2P52298 156 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 SPAG1Q07617 926 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 SMARCB1Q12824 385 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 PRPSAP1Q14558 356 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 PSG5Q15238 335 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 PSMD5Q16401 504 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 COA6Q5JTJ3 125 aaKnown RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4L9Q6RFH8 374 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 FAM71E2Q8N5Q1 922 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZFP41Q8N8Y5 198 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 NPBQ8NG41 125 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR9G4Q8NGQ1 327 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 GPX8Q8TED1 209 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 AURKBQ96GD4 344 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DNAJC1Q96KC8 554 aaKnown RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZIM3Q96PE6 472 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR2M2Q96R28 347 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 CTPS2Q9NRF8 586 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 MYEF2Q9P2K5 600 aaKnown RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUX4Q9UBX2 424 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 NUFIP1Q9UHK0 495 aaKnown RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 F11RQ9Y624 299 aaKnown RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 MRPS18BQ9Y676 258 aaKnown RBP3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 CROCCQ5TZA2 2017 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 SCN2AQ99250 2005 aa3.31□□□□□ -1.88
HMGB3P31-201ENST00000413333 KCNE1BA0A087WTH5 132 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 PEX7O00628 323 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 FKBP6O75344 327 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 C6orf47O95873 294 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 CD160O95971 181 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 PNMA6AP0CW24 399 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 CRISP2P16562 243 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF30P17039 623 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR1E1P30953 314 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 PEX19P40855 299 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 SLC11A1P49279 550 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 BCAP31P51572 246 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 UBE2MP61081 183 aaKnown RBP3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 SP4Q02446 784 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 PSG7Q13046 419 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 DNAJC3Q13217 504 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 KLHL40Q2TBA0 621 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 PTPN20Q4JDL3 420 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 CAVIN4Q5BKX8 364 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 BEX5Q5H9J7 111 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 SPESP1Q6UW49 350 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 JAGN1Q8N5M9 183 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR52E5Q8NH55 327 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 NUBPLQ8TB37 319 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 CA5BP1Q8WTZ4 195 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 HDHD3Q9BSH5 251 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms