RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 C6orf50Q9HD87 102 aa5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 IFT46Q9NQC8 304 aa5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 CLN6Q9NWW5 311 aa5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 SDHAF2Q9NX18 166 aa5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 ELF5Q9UKW6 265 aaPredicted RBP5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 PAIP2BQ9ULR5 123 aaKnown RBP5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 KCNIP3Q9Y2W7 256 aa5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 RGPD3A6NKT7 1758 aaPredicted RBP5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 RGPD4Q7Z3J3 1758 aa5.04□□□□□ -1.6
CBX1P3-201ENST00000413296 SLIT3O75094 1523 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 NCANO14594 1321 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 MYOM1P52179 1685 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 TRAV8-7A0A075B6U6 113 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 FAM231BA6NCW3 169 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 GAGE12JA6NER3 117 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 VSTM2BA6NLU5 285 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SNURFLB1AK76 121 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 TCP10L2B9ZVM9 353 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 C9J4A7 227 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 FTCDNL1E5RQL4 147 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 H3BMQ9 156 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 H7C0C1 242 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC9A3R1O14745 358 aaPredicted RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 CXCL13O43927 109 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 HPGDSO60760 199 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 ALOX12BO75342 701 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 MPZL1O95297 269 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 OAS1P00973 400 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SERPINA1P01009 418 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 CALB1P05937 261 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 RNH1P13489 461 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 HIST1H1CP16403 213 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 ITGA2P17301 1181 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 EDNRAP25101 427 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 YAP1P46937 504 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 HCAR3P49019 387 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 LBX1P52954 281 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 ZP1P60852 638 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 MLLT11Q13015 90 aaPredicted RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 RIGQ13278 110 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 LAGE3Q14657 143 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 EMC2Q15006 297 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 RAB35Q15286 201 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC9A3R2Q15599 337 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 TRIM16LQ309B1 348 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 CCNJQ5T5M9 372 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 OR8G2PQ6IF36 304 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 TRNP1Q6NT89 227 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 LRRN1Q6UXK5 716 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 CCNI2Q6ZMN8 369 aaPredicted RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 Q6ZNX1 250 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 Q6ZVQ6 151 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 MRGPREQ86SM8 312 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 RALGPS2Q86X27 583 aaPredicted RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 CALHM1Q8IU99 346 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 WDFY1Q8IWB7 410 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 BBS7Q8IWZ6 715 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 PRSS58Q8IYP2 241 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 STPG2Q8N412 459 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 CCDC54Q8NEL0 328 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 OR2T12Q8NG77 320 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 OR51F2Q8NH61 342 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC7A13Q8TCU3 470 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 APH1BQ8WW43 257 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 NELFBQ8WX92 580 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 HAS1Q92839 578 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 UFD1Q92890 307 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 PPWD1Q96BP3 646 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 ABHD8Q96I13 439 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC38A3Q99624 504 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 CABLES2Q9BTV7 478 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SHARPINQ9H0F6 387 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 ZCCHC4Q9H5U6 513 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 DHX35Q9H5Z1 703 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 ABCB9Q9NP78 766 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC2A9Q9NRM0 540 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 TPSG1Q9NRR2 321 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 INTS9Q9NV88 658 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 TMEM45AQ9NWC5 275 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 AGO1Q9UL18 857 aaKnown RBP5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 COPS3Q9UNS2 423 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 ERGIC3Q9Y282 383 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 OR2W1Q9Y3N9 320 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 USH1CQ9Y6N9 552 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 PDE4DIPQ5VU43 2346 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 PCNTO95613 3336 aa5.03□□□□□ -1.6
CBX1P3-201ENST00000413296 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 LOC101059948A0A1B0GTJ6 334 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 ANKRD20A5PA0PJZ0 165 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 PRR23AA6NEV1 266 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 EFCAB7A8K855 629 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 RNF212BA8MTL3 300 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 TRDCB7Z8K6 153 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 ENSAO43768 121 aaKnown RBP5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 SOX15O60248 233 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 TDP2O95551 362 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 ANGPTL1O95841 491 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 DHFRP00374 187 aa5.02□□□□□ -1.61
CBX1P3-201ENST00000413296 HBE1P02100 147 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms