RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SIX1Q15475 284 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 KCTD19Q17RG1 926 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 MICAQ29983 383 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 C5orf64Q2M2E5 130 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 C17orf58Q2M2W7 97 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 C1orf94Q6P1W5 598 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 REG3GQ6UW15 175 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 Q6ZN92 141 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF600Q6ZNG1 722 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 PLEKHG7Q6ZR37 379 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SLC7A5P1Q8MH63 180 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 KRT222Q8N1A0 295 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 RNF10Q8N5U6 811 aaKnown RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF557Q8N988 423 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 AQP11Q8NBQ7 271 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 OR4Q3Q8NH05 313 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 OR8D1Q8WZ84 308 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 TAF15Q92804 592 aaKnown RBP eCLIP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 EEF1AKMT3Q96AZ1 226 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 DYNLL2Q96FJ2 89 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 ITCHQ96J02 903 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 PGLYRP4Q96LB8 373 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 LGMNQ99538 433 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 KLHDC3Q9BQ90 382 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 TIMM29Q9BSF4 260 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SRRQ9GZT4 340 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 PARLQ9H300 379 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 TUBB1Q9H4B7 451 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 WDR55Q9H6Y2 383 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 UBE2ZQ9H832 354 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SIAEQ9HAT2 523 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SLC38A10Q9HBR0 1119 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 MRM3Q9HC36 420 aaKnown RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 AMBNQ9NP70 447 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 CTPS2Q9NRF8 586 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 CLN6Q9NWW5 311 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF282Q9UDV7 671 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 HMGXB4Q9UGU5 601 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 IGHV4-30-2A0A087WSY4 118 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 A0A087X002 238 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 FABP12A6NFH5 140 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 MPTX1A8MV57 137 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 F8VP50 259 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 K7EN84 100 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 NTN3O00634 580 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 MGRN1O60291 552 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 SNAP91O60641 907 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 SEMA4FO95754 770 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 OXTP01178 125 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 STSP08842 583 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 CT45A10P0DMU9 189 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ATP6V1B2P21281 511 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 PCK1P35558 622 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 CDC34P49427 236 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 GSK3BP49841 420 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 PLK1P53350 603 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ERVPABLB-1P60509 514 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 PDIA2Q13087 525 aaKnown RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 MAD2L1BPQ15013 274 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 QRICH1Q2TAL8 776 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 BSPRYQ5W0U4 402 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 UFSP1Q6NVU6 142 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ADAM5Q6NVV9 412 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 GDPD3Q7L5L3 318 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF329Q86UD4 541 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 CRLF3Q8IUI8 442 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 CDKL3Q8IVW4 592 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 C9orf40Q8IXQ3 194 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 VKORC1L1Q8N0U8 176 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ABHD12Q8N2K0 398 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 OR6K6Q8NGW6 343 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 OR6K2Q8NGY2 324 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 OR2L8Q8NGY9 312 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ING5Q8WYH8 240 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 SLC25A38Q96DW6 304 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 MED8Q96G25 268 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF75AQ96N20 296 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ZFP3Q96NJ6 502 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 KCTD14Q9BQ13 255 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 SYT15Q9BQS2 421 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF251Q9BRH9 671 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 SPZ1Q9BXG8 430 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 POTEKPQ9BYX7 375 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 SAV1Q9H4B6 383 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-204ENST00000412061 RMND1Q9NWS8 449 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 NDE1Q9NXR1 346 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 KCNIP1Q9NZI2 227 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 CACNG5Q9UF02 275 aa3.58□□□□□ -1.84
BRCA1-204ENST00000412061 KIF26BQ2KJY2 2108 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF816-ZNF321PA0A0X1KG74 233 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 TVP23AA6NH52 213 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 LYRM9A8MSI8 78 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 HACD1B0YJ81 288 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 K7ENP7 123 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 SLC17A2O00624 439 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 ZW10O43264 779 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 EMC8O43402 210 aa3.57□□□□□ -1.84
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