RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 LINC00574Q9H8X3 128 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 COPS3Q9UNS2 423 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 KCNIP3Q9Y2W7 256 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 SDK1Q7Z5N4 2213 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 CR1P17927 2039 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 VWA8A3KMH1 1905 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 ADGRA3Q8IWK6 1321 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 FANCIQ9NVI1 1328 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 DYSFO75923 2080 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 AP2A1O95782 977 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 LHBP01229 141 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 CAPN1P07384 714 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZNF688P0C7X2 276 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZNF250P15622 560 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 IL1RNP18510 177 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ME2P23368 584 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 RORAP35398 523 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 RABIFP47224 123 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 FAM222AQ5U5X8 452 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 METTL21CQ5VZV1 264 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 AP1ARQ63HQ0 302 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 SPNS3Q6ZMD2 512 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 TEX43Q6ZNM6 134 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 UTS2BQ765I0 119 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ASCL5Q7RTU5 278 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 HDDC2Q7Z4H3 204 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 SLC35F2Q8IXU6 374 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 OR9A2Q8NGT5 310 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 OSTF1Q92882 214 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 TMEM54Q969K7 222 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ATP6V1E2Q96A05 226 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 FAM3DQ96BQ1 224 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 SH3YL1Q96HL8 342 aaPredicted RBP0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 TIMM17AQ99595 171 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 TCHPQ9BT92 498 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ELOVL3Q9HB03 270 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 NEK6Q9HC98 313 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 RAB18Q9NP72 206 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 NLE1Q9NVX2 485 aaPredicted RBP0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 C21orf62Q9NYP8 219 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZNF492Q9P255 531 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 CTSFQ9UBX1 484 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 CHRNA9Q9UGM1 479 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 ATP10AO60312 1499 aa0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 RPRD2Q5VT52 1461 aaKnown RBP0.1□□□□□ -2.39
RNU2-55P-201ENST00000411146 IGHV1OR15-9A0A0B4J2B8 117 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 CENPVL3A0A0U1RRI6 287 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 A0A1W2PRQ8 180 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 OR5B21A6NL26 309 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 A8MXQ7 604 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 BTN3A3O00478 584 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 LCA5LO95447 670 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 NDUFB10O96000 172 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGHV2-5P01817 119 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 CCDC192P0DO97 292 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 TCN1P20061 433 aaPredicted RBP0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 IMPDH1P20839 514 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 SLC2A5P22732 501 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 DTYMKP23919 212 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 CYP2F1P24903 491 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 PSMA2P25787 234 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 SSTR5P35346 364 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 PRMT2P55345 433 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 ERVK-25P63136 954 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 TNFRSF17Q02223 184 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 GAMTQ14353 236 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 C2orf76Q3KRA6 126 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 PTPN20Q4JDL3 420 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 MPV17L2Q567V2 206 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 RAET1GQ6H3X3 334 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 TRIM40Q6P9F5 258 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 STK40Q8N2I9 435 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 CEP112Q8N8E3 955 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 ZFP41Q8N8Y5 198 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 ZNF557Q8N988 423 aaPredicted RBP0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 SPC24Q8NBT2 197 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 TTLQ8NG68 377 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 OR4D5Q8NGN0 318 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 UBE2E3Q969T4 207 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 CSPG4P5Q96PW8 444 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 RBBP8Q99708 897 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 ZSCAN16Q9H4T2 348 aaPredicted RBP0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 THAP9Q9H5L6 903 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 EDA2RQ9HAV5 297 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 AURKCQ9UQB9 309 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 KMT2EQ8IZD2 1858 aa0.09□□□□□ -2.4
RNU2-55P-201ENST00000411146 A0A1W2PNV4 684 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 TRIM64A6NGJ6 449 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 TRIM64BA6NI03 449 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 GPR89AB7ZAQ6 455 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 K7EMT4 169 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 MFNGO00587 321 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 PRRG1O14668 218 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 REM1O75628 298 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 GPR89BP0CG08 455 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 NTF3P20783 257 aa0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 CSRP1P21291 193 aaKnown RBP0.08□□□□□ -2.4
RNU2-55P-201ENST00000411146 PAX7P23759 505 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms