RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MMP15P51511 669 aa18.02■□□□□ 0.48
USP39-204ENST00000409766 PITPNAQ00169 270 aa18.02■□□□□ 0.48
USP39-204ENST00000409766 EIF2B1Q14232 305 aaKnown RBP18.02■□□□□ 0.48
USP39-204ENST00000409766 HACD4Q5VWC8 232 aa18.02■□□□□ 0.48
USP39-204ENST00000409766 DNM1P34Q6PK57 102 aa18.02■□□□□ 0.48
USP39-204ENST00000409766 ASB18Q6ZVZ8 466 aa18.02■□□□□ 0.48
USP39-204ENST00000409766 OR5M1Q8NGP8 315 aa18.02■□□□□ 0.48
USP39-204ENST00000409766 RPH3AQ9Y2J0 694 aaPredicted RBP18.02■□□□□ 0.48
USP39-204ENST00000409766 TRABD2BA6NFA1 517 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 HMX3A6NHT5 357 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 B4E171 279 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 WNT11O96014 354 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 PNPP00491 289 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 ZNF883P0CG24 379 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 TRAPPC2P0DI81 140 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 TRAPPC2BP0DI82 140 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 TSPAN7P41732 249 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 GPR176Q14439 515 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 PCK2Q16822 640 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 ODF4Q2M2E3 257 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 PRAMEF20Q5VT98 475 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 RSBN1Q5VWQ0 802 aaPredicted RBP18.01■□□□□ 0.47
USP39-204ENST00000409766 TMEM81Q6P7N7 255 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 OPN5Q6U736 354 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 BAIAP2L2Q6UXY1 529 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 KRT77Q7Z794 578 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 CMTM4Q8IZR5 234 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 OR11G2Q8NGC1 345 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 MCHR2Q969V1 340 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 TMEM106AQ96A25 262 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 MARVELD1Q9BSK0 173 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 LIN7BQ9HAP6 207 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 TRAV8-7A0A075B6U6 113 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 IGKV1D-43A0A0B4J1Z2 117 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 ADRB1P08588 477 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 MPLP40238 635 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 CLDN20P56880 219 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 SLC36A2Q495M3 483 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 OR4K17Q8NGC6 315 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 OR52N5Q8NH56 324 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 YIPF5Q969M3 257 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 UPRTQ96BW1 309 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 CMKLR1Q99788 373 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 TMEM185BQ9H7F4 350 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 PTGES2Q9H7Z7 377 aa18.01■□□□□ 0.47
USP39-204ENST00000409766 OPN1LWP04000 364 aa18■□□□□ 0.47
USP39-204ENST00000409766 ADH6P28332 368 aa18■□□□□ 0.47
USP39-204ENST00000409766 SLC6A1P30531 599 aa18■□□□□ 0.47
USP39-204ENST00000409766 P2RY4P51582 365 aa18■□□□□ 0.47
USP39-204ENST00000409766 ADPRHL1Q8NDY3 354 aa18■□□□□ 0.47
USP39-204ENST00000409766 RHBDD1Q8TEB9 315 aa18■□□□□ 0.47
USP39-204ENST00000409766 SLC25A38Q96DW6 304 aa18■□□□□ 0.47
USP39-204ENST00000409766 ZFP3Q96NJ6 502 aa18■□□□□ 0.47
USP39-204ENST00000409766 MRI1Q9BV20 369 aa18■□□□□ 0.47
USP39-204ENST00000409766 ABCG5Q9H222 651 aa18■□□□□ 0.47
USP39-204ENST00000409766 KLHL13Q9P2N7 655 aa18■□□□□ 0.47
USP39-204ENST00000409766 MRPS7Q9Y2R9 242 aaKnown RBP18■□□□□ 0.47
USP39-204ENST00000409766 LRP12Q9Y561 859 aa18■□□□□ 0.47
USP39-204ENST00000409766 FAM47E-STBD1D6RA91 191 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 FOLR3P41439 243 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 EIF1P41567 113 aaKnown RBP17.99■□□□□ 0.47
USP39-204ENST00000409766 RIDAP52758 137 aaKnown RBP17.99■□□□□ 0.47
USP39-204ENST00000409766 BIDP55957 195 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 CLDN12P56749 244 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 TATDN3Q17R31 274 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 OR7E24Q6IFN5 339 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 FCRLAQ7L513 359 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 MDGA2Q7Z553 956 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 ST6GAL2Q96JF0 529 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 EMC6Q9BV81 110 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 ARRDC1-AS1Q9H2J1 176 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 ZNF221Q9UK13 617 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 SLC22A13Q9Y226 551 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 A0A1W2PQ72 361 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 CTDSPLO15194 276 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 KHDRBS3O75525 346 aaKnown RBP17.99■□□□□ 0.47
USP39-204ENST00000409766 SP9P0CG40 484 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 CALCBP10092 127 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 ZNF823P16415 610 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 DDOSTP39656 456 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 AGFG1P52594 562 aaKnown RBP17.99■□□□□ 0.47
USP39-204ENST00000409766 DGCR2P98153 550 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 MFGE8Q08431 387 aaPredicted RBP17.99■□□□□ 0.47
USP39-204ENST00000409766 KCNJ8Q15842 424 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 ATAD3CQ5T2N8 411 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 STPG1Q5TH74 334 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 NDUFAF7Q7L592 441 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 PLCZ1Q86YW0 608 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 THRSPQ92748 146 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 PPP1R14AQ96A00 147 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 OR5B2Q96R09 309 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 MRPL13Q9BYD1 178 aaKnown RBP17.99■□□□□ 0.47
USP39-204ENST00000409766 OR5V1Q9UGF6 321 aa17.99■□□□□ 0.47
USP39-204ENST00000409766 ARPC4-TTLL3A0A0A6YYG9 625 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 A0A1W2PNR3 127 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 H3BSH0 61 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 NCOR1O75376 2440 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 AQP8O94778 261 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 CD3GP09693 182 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 HLA-DMAP28067 261 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms