RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ZNF433Q8N7K0 673 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 CNBD2Q96M20 576 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 FOXB1Q99853 325 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 SH3GL3Q99963 347 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 PRRG3Q9BZD7 231 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 NMNAT2Q9BZQ4 307 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 AMBNQ9NP70 447 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 HCFC1P51610 2035 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 MAGEA13PA6NCF6 341 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF99A8MXY4 864 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 ENTPD6O75354 484 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 KHDRBS3O75525 346 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 PSKH1P11801 424 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 MPGP29372 298 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 FMO3P31513 532 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 CCKARP32238 428 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 ASCL1P50553 236 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 SLC25A35Q3KQZ1 300 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF813Q6ZN06 617 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 OR2T4Q8NH00 348 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF582Q96NG8 517 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 APOL4Q9BPW4 351 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 NELFAQ9H3P2 528 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 KCNJ16Q9NPI9 418 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 TAS2R16Q9NYV7 291 aa12.38□□□□□ -0.43
CHRNA1-204ENST00000409323 MYO18BQ8IUG5 2567 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF503-AS2A6NEH8 195 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 CCDC182A6NF36 153 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 TRIM64A6NGJ6 449 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 OR6C65A6NJZ3 312 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 CLDN14O95500 239 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 GABRB1P18505 474 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 SLC2A5P22732 501 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 CRABP1P29762 137 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 CAPZA2P47755 286 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF84P51523 738 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 CHN2P52757 468 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 MAD2L1BPQ15013 274 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 C10orf128Q5T292 105 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 SFRP5Q5T4F7 317 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 SHFQ7M4L6 423 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 BHLHA15Q7RTS1 189 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 ABHD12BQ7Z5M8 362 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 ZBTB46Q86UZ6 589 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 DEPDC4Q8N2C3 294 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF808Q8N4W9 903 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 OR8J1Q8NGP2 316 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 OR1K1Q8NGR3 316 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 OR52N5Q8NH56 324 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 FGFBP3Q8TAT2 258 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 KISS1RQ969F8 398 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 ZC3HAV1LQ96H79 300 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 C1QTNF6Q9BXI9 259 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 WDR76Q9H967 626 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 TMEM38BQ9NVV0 291 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 FKBP7Q9Y680 259 aa12.37□□□□□ -0.43
CHRNA1-204ENST00000409323 A1L4Q6 167 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 CENPBD1B2RD01 187 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 RPL36A-HNRNPH2H7BZ11 118 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 C19orf84I3L1E1 186 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 SELENOFO60613 162 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 WBP4O75554 376 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 TFP02787 698 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 LYNP07948 512 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 COX5AP20674 150 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 IL32P24001 234 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 LAP3P28838 519 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 CD79BP40259 229 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 NAA10P41227 235 aaPredicted RBP12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 SLC25A1P53007 311 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 ISL1P61371 349 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 PIGFQ07326 219 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 BLMHQ13867 455 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 LINC01590Q5TEZ4 76 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 AADACL4Q5VUY2 407 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 XKRXQ6PP77 449 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 CORO6Q6QEF8 472 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 LINC00346Q8IVM7 164 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 RHOXF1Q8NHV9 184 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 C11orf40Q8WZ69 217 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 NABP1Q96AH0 204 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 S100PBPQ96BU1 408 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 SNX18Q96RF0 628 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 RHNO1Q9BSD3 238 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 MRPL22Q9NWU5 206 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 H2AFY2Q9P0M6 372 aaPredicted RBP12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 FLNCQ14315 2725 aa12.36□□□□□ -0.43
CHRNA1-204ENST00000409323 AHCYL1O43865 530 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 HLA-HP01893 362 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 GAAP10253 952 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 NR2C1P13056 603 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 GSTT1P30711 240 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 UGT2B10P36537 528 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF133P52736 654 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 HCCSP53701 268 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms