RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 OR6K3Q8NGY3 331 aa18.06■□□□□ 0.48
CHKB-201ENST00000406938 RBM24Q9BX46 236 aaKnown RBP18.06■□□□□ 0.48
CHKB-201ENST00000406938 CCDC90BQ9GZT6 254 aa18.06■□□□□ 0.48
CHKB-201ENST00000406938 WDR76Q9H967 626 aa18.06■□□□□ 0.48
CHKB-201ENST00000406938 GPR35Q9HC97 309 aa18.06■□□□□ 0.48
CHKB-201ENST00000406938 MRPL22Q9NWU5 206 aaKnown RBP18.06■□□□□ 0.48
CHKB-201ENST00000406938 PRSS50Q9UI38 385 aa18.06■□□□□ 0.48
CHKB-201ENST00000406938 DOCK7Q96N67 2140 aa18.06■□□□□ 0.48
CHKB-201ENST00000406938 MPZL1O95297 269 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 RAB36O95755 333 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 TFP02787 698 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 MT-ND2P03891 347 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 SMIM18P0DKX4 95 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 LAP3P28838 519 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 CDAP32320 146 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 ROR2Q01974 943 aaKnown RBP18.05■□□□□ 0.48
CHKB-201ENST00000406938 HSF2Q03933 536 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 MEP1BQ16820 701 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 ZNF773Q6PK81 442 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 TFAP2EQ6VUC0 442 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.05■□□□□ 0.48
CHKB-201ENST00000406938 UBE2J2Q8N2K1 259 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 SMAP2Q8WU79 429 aaPredicted RBP18.05■□□□□ 0.48
CHKB-201ENST00000406938 TMEM80Q96HE8 168 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 BBC3Q96PG8 261 aaPredicted RBP18.05■□□□□ 0.48
CHKB-201ENST00000406938 MARCH7Q9H992 704 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 FGF20Q9NP95 211 aaPredicted RBP18.05■□□□□ 0.48
CHKB-201ENST00000406938 MALT1Q9UDY8 824 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 DIMT1Q9UNQ2 313 aaKnown RBP18.05■□□□□ 0.48
CHKB-201ENST00000406938 TRGV8A0A0C4DH27 118 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 J3QRE1 110 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 CRHP06850 196 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 CEACAM8P31997 349 aaPredicted RBP18.05■□□□□ 0.48
CHKB-201ENST00000406938 ZNF84P51523 738 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 CASP6P55212 293 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 CEACAM16Q2WEN9 425 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 PRSS48Q7RTY5 328 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 HTRA1Q92743 480 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 INTS14Q96SY0 518 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 SEC61A2Q9H9S3 476 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 TAS2R16Q9NYV7 291 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 UPB1Q9UBR1 384 aa18.05■□□□□ 0.48
CHKB-201ENST00000406938 ZGRF1Q86YA3 2104 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 ZNF587BE7ETH6 402 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 IGHA1P01876 353 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 ATP6V1B1P15313 513 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 DCKP27707 260 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 ADAM8P78325 824 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 PMPCAQ10713 525 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 FBXW9Q5XUX1 488 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 FOXL2NBQ6ZUU3 175 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 NCCRP1Q6ZVX7 275 aaPredicted RBP18.04■□□□□ 0.48
CHKB-201ENST00000406938 OR10H4Q8NGA5 316 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 OR6N2Q8NGY6 317 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 TBX5Q99593 518 aa18.04■□□□□ 0.48
CHKB-201ENST00000406938 ARHGAP21Q5T5U3 1957 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 A0A087WXM4 84 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 C12orf71A8MTZ7 269 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 RPL36A-HNRNPH2H7BZ11 118 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 HRGP04196 525 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 SCG5P05408 212 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 PSKH1P11801 424 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 RPS27P42677 84 aaKnown RBP18.03■□□□□ 0.48
CHKB-201ENST00000406938 CA7P43166 264 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 FAPQ12884 760 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 MRPL49Q13405 166 aaKnown RBP18.03■□□□□ 0.48
CHKB-201ENST00000406938 SLC16A9Q7RTY1 509 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 BTLAQ7Z6A9 289 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 SLC35F2Q8IXU6 374 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 C11orf40Q8WZ69 217 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 STARD4Q96DR4 205 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 POLE4Q9NR33 117 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 OSGIN2Q9Y236 505 aa18.03■□□□□ 0.48
CHKB-201ENST00000406938 SMG1Q96Q15 3661 aaKnown RBP18.03■□□□□ 0.48
CHKB-201ENST00000406938 E9PLN8 166 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 MRPS14O60783 128 aaKnown RBP18.02■□□□□ 0.48
CHKB-201ENST00000406938 SEC14L2O76054 403 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 ENTPD1P49961 510 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 HCCSP53701 268 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 SPARTQ8N0X7 666 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 RFLNBQ8N5W9 214 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 NABP1Q96AH0 204 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 FOXB1Q99853 325 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 VKORC1Q9BQB6 163 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 SFXN3Q9BWM7 321 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 JAM3Q9BX67 310 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 CDCA4Q9BXL8 241 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 EMC7Q9NPA0 242 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 PCDHGB1Q9Y5G3 927 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 SNX5Q9Y5X3 404 aa18.02■□□□□ 0.48
CHKB-201ENST00000406938 RP1L1Q8IWN7 2480 aaPredicted RBP18.02■□□□□ 0.48
CHKB-201ENST00000406938 CGAP01215 116 aa18.01■□□□□ 0.47
CHKB-201ENST00000406938 SPARCP09486 303 aa18.01■□□□□ 0.47
CHKB-201ENST00000406938 MYL12AP19105 171 aa18.01■□□□□ 0.47
CHKB-201ENST00000406938 CTSSP25774 331 aa18.01■□□□□ 0.47
CHKB-201ENST00000406938 FOXG1P55316 489 aaPredicted RBP18.01■□□□□ 0.47
CHKB-201ENST00000406938 ACTC1P68032 377 aa18.01■□□□□ 0.47
CHKB-201ENST00000406938 ACTA1P68133 377 aa18.01■□□□□ 0.47
CHKB-201ENST00000406938 MRPS34P82930 218 aaKnown RBP18.01■□□□□ 0.47
CHKB-201ENST00000406938 C9orf135Q5VTT2 229 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms