RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SAMD4BQ5PRF9 694 aaKnown RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 MARC1Q5VT66 337 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 CARD17Q5XLA6 110 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 WDR74Q6RFH5 385 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 ENPP6Q6UWR7 440 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 BAIAP2L2Q6UXY1 529 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 FAM183BPQ6ZVS7 135 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 GTSCR1Q86UQ5 136 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 UNC93AQ86WB7 457 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 GPR65Q8IYL9 337 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR2L13Q8N349 312 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 RIBC1Q8N443 379 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 LRRC52Q8N7C0 313 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 C12orf29Q8N999 325 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 MAPK1IP1LQ8NDC0 245 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 RXFP2Q8WXD0 754 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 HAUS1Q96CS2 278 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 C9orf72Q96LT7 481 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF641Q96N77 438 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 RNF157Q96PX1 679 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 PEBP4Q96S96 227 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 KIR2DL4Q99706 377 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 MRPL45Q9BRJ2 306 aaKnown RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 C19orf24Q9BVV8 132 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 SRXN1Q9BYN0 137 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 GPR61Q9BZJ8 451 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 NMUR2Q9GZQ4 415 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 GFRA4Q9GZZ7 299 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 CXCL16Q9H2A7 254 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 RBKSQ9H477 322 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 NCOR1P1Q9H4R4 102 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 NIPAL2Q9H841 368 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 NMRAL1Q9HBL8 299 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 EURLQ9NYK6 297 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 PAK5Q9P286 719 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 RABL2AQ9UBK7 228 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 APOBEC3BQ9UH17 382 aaKnown RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 Q9Y3F1 56 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 BRCA1P38398 1863 aaKnown RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 A0A0G2JMZ2 1700 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 A0A1B0GUS0 222 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 GOLGA6L7A0A1B0GV03 622 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 TMEM120BA0PK00 339 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF705EA8MWA4 302 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 APOC4-APOC2K7ER74 178 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 FOXE1O00358 373 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 PIRO00625 290 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 LATO43561 262 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF354AO60765 605 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 LYPD3O95274 346 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 APOC2P02655 101 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ATP1B2P14415 290 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ETS2P15036 469 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 GDF1P27539 372 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 HTR1FP30939 366 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 SDC4P31431 198 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 RDXP35241 583 aaKnown RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 TPMTP51580 245 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 CDH6P55285 790 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 GPX6P59796 221 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 DYNLT1P63172 113 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 CDK16Q00536 496 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 PDIA2Q13087 525 aaKnown RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 SRSF5Q13243 272 aaKnown RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ITIH4Q14624 930 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 PRR4Q16378 134 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 LRRC36Q1X8D7 754 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 GSG1Q2KHT4 349 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 GOLGA7BQ2TAP0 167 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 C15orf32Q32M92 178 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR2B11Q5JQS5 317 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ATAD3CQ5T2N8 411 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 PRAMEF20Q5VT98 475 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ANKRD22Q5VYY1 191 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 CST9Q5W186 159 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 TMEM107Q6UX40 140 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 TFAP2EQ6VUC0 442 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 LRRC74BQ6ZQY2 392 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 C3orf62Q6ZUJ4 267 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 CCDC121Q6ZUS5 278 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 FRA10AC1Q70Z53 315 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 NUDCD3Q8IVD9 361 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 NAXDQ8IW45 347 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 LRRC34Q8IZ02 419 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZBED8Q8IZ13 594 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 GPR137CQ8N3F9 429 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 PQLC3Q8N755 202 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 RHOXF1Q8NHV9 184 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 PYROXD1Q8WU10 500 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ANKRD49Q8WVL7 239 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 DNAJB3Q8WWF6 145 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 STMN2Q93045 179 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 HSFY1Q96LI6 401 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 RNF2Q99496 336 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 PAXXQ9BUH6 204 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 CALN1Q9BXU9 219 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 CHIAQ9BZP6 476 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 ILKAPQ9H0C8 392 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 NXF3Q9H4D5 531 aaKnown RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 FAM49BQ9NUQ9 324 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms