RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MGRN1O60291 552 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 FARS2O95363 451 aaKnown RBP9.26□□□□□ -0.93
RPAIN-204ENST00000405578 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF3P17036 446 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 PAICSP22234 425 aaKnown RBP9.26□□□□□ -0.93
RPAIN-204ENST00000405578 IGHV1-2P23083 117 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 PAX7P23759 505 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 EDNRAP25101 427 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 CRABP1P29762 137 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 GIPRP48546 466 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 ALDH3A2P51648 485 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 CRISP1P54107 249 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 FXYD6P3P58550 94 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 UBE2NP61088 152 aaKnown RBP9.26□□□□□ -0.93
RPAIN-204ENST00000405578 GINS1Q14691 196 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 HIST3H3Q16695 136 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 CEACAM16Q2WEN9 425 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 PGGHGQ32M88 737 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 SLC35F1Q5T1Q4 408 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 C9orf135Q5VTT2 229 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 LEG1Q6P5S2 330 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 ANKRD16Q6P6B7 361 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 PHC2Q8IXK0 858 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 CCDC36Q8IYA8 594 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 LNX2Q8N448 690 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF433Q8N7K0 673 aaPredicted RBP9.26□□□□□ -0.93
RPAIN-204ENST00000405578 OR52E2Q8NGJ4 325 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 HSD17B8Q92506 261 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 HDAC2Q92769 488 aaKnown RBP9.26□□□□□ -0.93
RPAIN-204ENST00000405578 MCHR2Q969V1 340 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 RASD2Q96D21 266 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 SNX18Q96RF0 628 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 MED18Q9BUE0 208 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 PLA2G12AQ9BZM1 189 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 ACTR6Q9GZN1 396 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF226Q9NYT6 803 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 REV1Q9UBZ9 1251 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 SLC22A23A1A5C7 686 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 OR5H1A6NKK0 313 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 RAD51DO75771 328 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 WNT11O96014 354 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 ALPLP05186 524 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 IGFBP1P08833 259 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-204ENST00000405578 HIST1H1CP16403 213 aaKnown RBP9.25□□□□□ -0.93
RPAIN-204ENST00000405578 CD53P19397 219 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 GRK5P34947 590 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 ARF1P84077 181 aaKnown RBP9.25□□□□□ -0.93
RPAIN-204ENST00000405578 RUNX1T1Q06455 604 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 SLC34A1Q06495 639 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 LGALS3BPQ08380 585 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 NRN1LQ496H8 165 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 MESTQ5EB52 335 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 Q5PR19 223 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 TIMM23BQ5SRD1 257 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 PACRGLQ8N7B6 248 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 OR8D4Q8NGM9 314 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 OR4K13Q8NH42 304 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 S100PBPQ96BU1 408 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 DACH2Q96NX9 599 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 MUS81Q96NY9 551 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 KCNN2Q9H2S1 579 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 VCX3BQ9H321 246 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 RIBC2Q9H4K1 309 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 RERGLQ9H628 205 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 PLEKHF2Q9H8W4 249 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 OBP2BQ9NPH6 170 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 BEX4Q9NWD9 120 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-204ENST00000405578 VSX1Q9NZR4 365 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-204ENST00000405578 AMDHD2Q9Y303 409 aa9.25□□□□□ -0.93
RPAIN-204ENST00000405578 KIAA1549Q9HCM3 1950 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 SH3D21A4FU49 640 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 H7C1C5 153 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 SLC16A7O60669 478 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 KHDRBS3O75525 346 aaKnown RBP9.24□□□□□ -0.93
RPAIN-204ENST00000405578 TP53P04637 393 aaPredicted RBP9.24□□□□□ -0.93
RPAIN-204ENST00000405578 ITGA5P08648 1049 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 OR8G3PP0DMU2 310 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 NPR2P20594 1047 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 CAPZA2P47755 286 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 CENPAP49450 140 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF133P52736 654 aaPredicted RBP9.24□□□□□ -0.93
RPAIN-204ENST00000405578 LCN6P62502 163 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.24□□□□□ -0.93
RPAIN-204ENST00000405578 NPRL3Q12980 569 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 PTGES3Q15185 160 aaKnown RBP9.24□□□□□ -0.93
RPAIN-204ENST00000405578 GABRA6Q16445 453 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 SNAPC1Q16533 368 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 C10orf128Q5T292 105 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 ANKRD34AQ69YU3 496 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 LRFN4Q6PJG9 635 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF813Q6ZN06 617 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 DPPA2Q7Z7J5 298 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 IQCF1Q8N6M8 205 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 SDR9C7Q8NEX9 313 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 OR1K1Q8NGR3 316 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 OR2T4Q8NH00 348 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 NSMAFQ92636 917 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 Q96MF0 132 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 RDH12Q96NR8 316 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms