RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 OR9Q1Q8NGQ5 310 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 CA5BP1Q8WTZ4 195 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ZNRF4Q8WWF5 429 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ITLN2Q8WWU7 325 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 NSMAFQ92636 917 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 RFKQ969G6 155 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 OTULINQ96BN8 352 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 LRRC46Q96FV0 321 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ZNF582Q96NG8 517 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ALKBH3Q96Q83 286 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 FOXB1Q99853 325 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 RERGLQ9H628 205 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 KCNJ16Q9NPI9 418 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 UGT2A1Q9Y4X1 527 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 NBASA2RRP1 2371 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 CIB4A0PJX0 185 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 SLC22A31A6NKX4 558 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 J3QKU1 62 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 ZG16O60844 167 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 ENTPD6O75354 484 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 WBP4O75554 376 aaKnown RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 CLDN14O95500 239 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 HRGP04196 525 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 GYPBP06028 91 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 PSMB1P20618 241 aaKnown RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 FMO3P31513 532 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 PYCR1P32322 319 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 CD79BP40259 229 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 HSF2Q03933 536 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 APOFQ13790 326 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 GABRA6Q16445 453 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 LINC01590Q5TEZ4 76 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 FAM27BQ5VT28 67 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 OR7E24Q6IFN5 339 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 ANKRD16Q6P6B7 361 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 STAC2Q6ZMT1 411 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 BCDIN3DQ7Z5W3 292 aaKnown RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 CXorf67Q86X51 503 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 C1orf162Q8NEQ5 155 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 PROKR2Q8NFJ6 384 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 OR1K1Q8NGR3 316 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 APH1BQ8WW43 257 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 BCL2L2Q92843 193 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 MARVELD3Q96A59 401 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 OR10A4Q9H209 315 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 NELFAQ9H3P2 528 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 MARCH7Q9H992 704 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 SEC61A2Q9H9S3 476 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 SIAEQ9HAT2 523 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 TMEM38BQ9NVV0 291 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 HAO2Q9NYQ3 351 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 AASSQ9UDR5 926 aa10.82□□□□□ -0.68
LINC00339-201ENST00000404210 WARS2Q9UGM6 360 aaKnown RBP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00339-201ENST00000404210 A0A1W2PPL8 197 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 FAM171A2A8MVW0 826 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 FARS2O95363 451 aaKnown RBP10.81□□□□□ -0.68
LINC00339-201ENST00000404210 OR8G3PP0DMU2 310 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 HTR1FP30939 366 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 CDH11P55287 796 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 CXCR4P61073 352 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 LSM6P62312 80 aaKnown RBP10.81□□□□□ -0.68
LINC00339-201ENST00000404210 CSNK2BP67870 215 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 FAM27E3Q08E93 113 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 SGCAQ16586 387 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 LCN1P1Q5VSP4 162 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 C9orf135Q5VTT2 229 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 ZNF813Q6ZN06 617 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 CCDC36Q8IYA8 594 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 SLC22A24Q8N4F4 322 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 OR51L1Q8NGJ5 315 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 RNASE6Q93091 150 aaKnown RBP10.81□□□□□ -0.68
LINC00339-201ENST00000404210 NABP1Q96AH0 204 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 WACQ9BTA9 647 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 DNAJC27Q9NZQ0 273 aa10.81□□□□□ -0.68
LINC00339-201ENST00000404210 RPL36Q9Y3U8 105 aaKnown RBP10.81□□□□□ -0.68
LINC00339-201ENST00000404210 DIDO1Q9BTC0 2240 aaKnown RBP10.81□□□□□ -0.68
LINC00339-201ENST00000404210 HIVEP3Q5T1R4 2406 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 FAM90A27PA6NNH2 459 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 C16orf97H3BN30 126 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 PYCARD-AS1I3L0S3 204 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 LYZL6O75951 148 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 HLA-DQA2P01906 255 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 TFP02787 698 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 SCG5P05408 212 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 GAAP10253 952 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 ZNF823P16415 610 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 PAX7P23759 505 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 GSTT1P30711 240 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 CDAP32320 146 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 RPS7P62081 194 aaKnown RBP10.8□□□□□ -0.68
LINC00339-201ENST00000404210 MED21Q13503 144 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 GGTLC2Q14390 218 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 CDSNQ15517 529 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms