RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 FBXL3Q9UKT7 428 aa16.67■□□□□ 0.26
RTN4-207ENST00000402434 ATP23Q9Y6H3 246 aa16.67■□□□□ 0.26
RTN4-207ENST00000402434 U3KQV3 271 aa16.67■□□□□ 0.26
RTN4-207ENST00000402434 TEX13CA0A0J9YWL9 993 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 IMPA2O14732 288 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 PATE4P0C8F1 98 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 CALCRP30988 508 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 SLC6A6P31641 620 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 CDAP32320 146 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 PTDSS1P48651 473 aaKnown RBP16.66■□□□□ 0.26
RTN4-207ENST00000402434 RPS6KA3P51812 740 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 KRR1Q13601 381 aaKnown RBP16.66■□□□□ 0.26
RTN4-207ENST00000402434 SLC36A2Q495M3 483 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 FOXL2NBQ6ZUU3 175 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 ADCK1Q86TW2 530 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 OR4F15Q8NGB8 312 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 RASD2Q96D21 266 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 MS4A3Q96HJ5 214 aa16.66■□□□□ 0.26
RTN4-207ENST00000402434 TRAF4Q9BUZ4 470 aaPredicted RBP16.66■□□□□ 0.26
RTN4-207ENST00000402434 VSX1Q9NZR4 365 aaPredicted RBP16.66■□□□□ 0.26
RTN4-207ENST00000402434 IGHV2OR16-5A0A0B4J2B6 119 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 H7C1C5 153 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 RAB36O95755 333 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 SERPINA5P05154 406 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 MMP7P09237 267 aaPredicted RBP16.65■□□□□ 0.26
RTN4-207ENST00000402434 APOBEC3AP31941 199 aaPredicted RBP16.65■□□□□ 0.26
RTN4-207ENST00000402434 LCN6P62502 163 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 ADAM8P78325 824 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 NKX6-1P78426 367 aaPredicted RBP16.65■□□□□ 0.26
RTN4-207ENST00000402434 HGFACQ04756 655 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 AGAP6Q5VW22 663 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 SLC16A14Q7RTX9 510 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 KRTAP1-3Q8IUG1 177 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 ZNF584Q8IVC4 421 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 AQP11Q8NBQ7 271 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 NUP37Q8NFH4 326 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 SLCO4A1Q96BD0 722 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 SAMD8Q96LT4 415 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 DGCR6LQ9BY27 220 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 IL20Q9NYY1 176 aa16.65■□□□□ 0.26
RTN4-207ENST00000402434 SOCS2O14508 198 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 IDH3BO43837 385 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 PPP1R3DO95685 299 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 ZNF35P13682 527 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 CDKN2AP42771 156 aaKnown RBP16.64■□□□□ 0.25
RTN4-207ENST00000402434 PTH2RP49190 550 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 FABP6P51161 128 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 RPL13AP3Q6NVV1 102 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 RASSF6Q6ZTQ3 369 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 PTCHD4Q6ZW05 846 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 ASRGL1Q7L266 308 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 MUC15Q8N387 334 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 ERMAPQ96PL5 475 aaPredicted RBP16.64■□□□□ 0.25
RTN4-207ENST00000402434 YY1AP1Q9H869 796 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 CBLN4Q9NTU7 201 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 CDH10Q9Y6N8 788 aa16.64■□□□□ 0.25
RTN4-207ENST00000402434 ARRDC5A6NEK1 342 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 FKBP6O75344 327 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 GUCA1AP43080 201 aaPredicted RBP16.63■□□□□ 0.25
RTN4-207ENST00000402434 RAB39AQ14964 217 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 ETFDHQ16134 617 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 SGCAQ16586 387 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 SHEQ5VZ18 495 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 C11orf71Q6IPW1 123 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 TMEM53Q6P2H8 277 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 PRSS57Q6UWY2 283 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 CD300LDQ6UXZ3 194 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 LURAP1LQ8IV03 231 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 FBXL14Q8N1E6 418 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 LRRC18Q8N456 261 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 IFT27Q9BW83 186 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 SYT4Q9H2B2 425 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 EGLN3Q9H6Z9 239 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 CA10Q9NS85 328 aa16.63■□□□□ 0.25
RTN4-207ENST00000402434 CTLA4P16410 223 aa16.62■□□□□ 0.25
RTN4-207ENST00000402434 CBX1P83916 185 aa16.62■□□□□ 0.25
RTN4-207ENST00000402434 OR10G2Q8NGC3 310 aa16.62■□□□□ 0.25
RTN4-207ENST00000402434 PERPQ96FX8 193 aa16.62■□□□□ 0.25
RTN4-207ENST00000402434 SNX18Q96RF0 628 aa16.62■□□□□ 0.25
RTN4-207ENST00000402434 KCNN2Q9H2S1 579 aa16.62■□□□□ 0.25
RTN4-207ENST00000402434 RNF121Q9H920 327 aa16.62■□□□□ 0.25
RTN4-207ENST00000402434 GNGT2O14610 69 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 CST2P09228 141 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 HIST1H1CP16403 213 aaKnown RBP16.61■□□□□ 0.25
RTN4-207ENST00000402434 GSTM3P21266 225 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 NR4A1P22736 598 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 LAP3P28838 519 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 ERFP50548 548 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 MST1LQ2TV78 715 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 TMEM179BQ7Z7N9 219 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 TGIF2LYQ8IUE0 185 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 GIPC3Q8TF64 312 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 GTPBP3Q969Y2 492 aaKnown RBP16.61■□□□□ 0.25
RTN4-207ENST00000402434 FBXO17Q96EF6 278 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 FEVQ99581 238 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 NUAK2Q9H093 628 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 C1orf198Q9H425 327 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 ZNF442Q9H7R0 627 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 POLE4Q9NR33 117 aa16.61■□□□□ 0.25
RTN4-207ENST00000402434 DNAJB9Q9UBS3 223 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms