RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GGT2P36268 569 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 AQP4P55087 323 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 TGFBR3Q03167 851 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 PLBD1Q6P4A8 553 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 NABP1Q96AH0 204 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 BOD1Q96IK1 185 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 WFIKKN1Q96NZ8 548 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 IL4I1Q96RQ9 567 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 ACTR6Q9GZN1 396 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 TMEM38BQ9NVV0 291 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 FKBP7Q9Y680 259 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 A0A1W2PR80 420 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 ZNF503-AS2A6NEH8 195 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 PRSS44E7EML9 344 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 IGFBP2P18065 325 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 CRABP1P29762 137 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 PYCR1P32322 319 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 ADARB1P78563 741 aaKnown RBP13.96□□□□□ -0.17
HMGA1-204ENST00000401473 WDR31Q8NA23 367 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 BBS1Q8NFJ9 593 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 LINC01560Q8TB33 94 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 OTULINQ96BN8 352 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 SLC38A2Q96QD8 506 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 PITX2Q99697 317 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 SEC61A2Q9H9S3 476 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 ZNF224Q9NZL3 707 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 AASSQ9UDR5 926 aa13.96□□□□□ -0.17
HMGA1-204ENST00000401473 OR5H1A6NKK0 313 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 NR2C1P13056 603 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SPI1P17947 270 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 IL32P24001 234 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SLC25A1P53007 311 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 STK11Q15831 433 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 TBRG1Q3YBR2 411 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 OR7E24Q6IFN5 339 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 ANKRD16Q6P6B7 361 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 KLHL24Q6TFL4 600 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 LYPD4Q6UWN0 246 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF813Q6ZN06 617 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SLC22A24Q8N4F4 322 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 FGFBP3Q8TAT2 258 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 FAM81AQ8TBF8 368 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SH3GL3Q99963 347 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 TEX12Q9BXU0 123 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF226Q9NYT6 803 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 PLEKHB1Q9UF11 243 aaPredicted RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 GMPPBQ9Y5P6 360 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 FBN2P35556 2912 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 UNC79Q9P2D8 2635 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 PRR23D1E9PI22 279 aaPredicted RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 KHDRBS3O75525 346 aaKnown RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 THBDP07204 575 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 GNAO1P09471 354 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 PATE4P0C8F1 98 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 PRR23D2P0DMB1 279 aaPredicted RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF84P51523 738 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SH3BGRP55822 239 aaPredicted RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 MRPS34P82930 218 aaKnown RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SORDQ00796 357 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 TAB1Q15750 504 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 LINC01590Q5TEZ4 76 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 HIST2H2BCQ6DN03 193 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 UGT2A3Q6UWM9 527 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 B3GLCTQ6Y288 498 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 FOXL2NBQ6ZUU3 175 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SKA3Q8IX90 412 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 LRRC18Q8N456 261 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 DHRSXQ8N5I4 330 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 ACBD4Q8NC06 268 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 C1orf162Q8NEQ5 155 aaPredicted RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 STEAP2Q8NFT2 490 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 OR52N5Q8NH56 324 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 TMEM163Q8TC26 289 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 CYGBQ8WWM9 190 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 LRRC46Q96FV0 321 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 PLEKHA8Q96JA3 519 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 RACGAP1Q9H0H5 632 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 OR51V1Q9H2C8 321 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 PLCE1Q9P212 2302 aa13.95□□□□□ -0.18
HMGA1-204ENST00000401473 SETXQ7Z333 2677 aaKnown RBP13.95□□□□□ -0.18
HMGA1-204ENST00000401473 H0YJX3 145 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 TFP02787 698 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 LAP3P28838 519 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 TUBA1BP68363 451 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 TUBA4AP68366 448 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 SGCAQ16586 387 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 MEP1BQ16820 701 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 TIMM23BQ5SRD1 257 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 AADACL4Q5VUY2 407 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 TUBA1AQ71U36 451 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 CXXC5Q7LFL8 322 aaKnown RBP13.94□□□□□ -0.18
HMGA1-204ENST00000401473 GLB1L2Q8IW92 636 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 OR8J1Q8NGP2 316 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 OR2T4Q8NH00 348 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 TFAP2CQ92754 450 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 ADI1Q9BV57 179 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 VCXQ9H320 206 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 SIAEQ9HAT2 523 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 SLC17A5Q9NRA2 495 aa13.94□□□□□ -0.18
HMGA1-204ENST00000401473 A0A1W2PPL8 197 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms