RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PSME3P61289 254 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 RPL27P61353 136 aaKnown RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 MRPS34P82930 218 aaKnown RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 HSF2Q03933 536 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 FAM205BPQ63HN1 556 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 RGS7BPQ6MZT1 257 aaPredicted RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 RRM2BQ7LG56 351 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 OAFQ86UD1 273 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 CYP4Z1Q86W10 505 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF786Q8N393 782 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 OR51A7Q8NH64 312 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 UBASH3BQ8TF42 649 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 NSMAFQ92636 917 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 NMD3Q96D46 503 aaKnown RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 RBP7Q96R05 134 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 TPK1Q9H3S4 243 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 SIAEQ9HAT2 523 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 CCNB1IP1Q9NPC3 277 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 SPAG4Q9NPE6 437 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 RPS6KA6Q9UK32 745 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 CDC42EP3Q9UKI2 254 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF346Q9UL40 294 aaKnown RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 FZR1Q9UM11 496 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 TRAV27A0A087WT01 109 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 A0A087WUU8 490 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 A0A1W2PPW3 197 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 A6NIZ1 184 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 GMNNO75496 209 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 PRSS23O95084 383 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 SNAP29O95721 258 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 MMP7P09237 267 aaPredicted RBP11.52□□□□□ -0.57
VCX3A-202ENST00000398729 FAM157BP0CG42 384 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 CCL2P13500 99 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 NCK1P16333 377 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF23P17027 643 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 GIFP27352 417 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 CDAP32320 146 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 APLNRP35414 380 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 GUCA1AP43080 201 aaPredicted RBP11.52□□□□□ -0.57
VCX3A-202ENST00000398729 RAD52P43351 418 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 RAP1BP61224 184 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 RAP1AP62834 184 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 FMODQ06828 376 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 SLC25A47Q6Q0C1 308 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 MBOAT2Q6ZWT7 520 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 CPLX4Q7Z7G2 160 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 IGFN1Q86VF2 1251 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 LRP11Q86VZ4 500 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 MEX3DQ86XN8 651 aaKnown RBP11.52□□□□□ -0.57
VCX3A-202ENST00000398729 LRRC75AQ8NAA5 344 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 ANKRD19PQ9H560 264 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 TMEM160Q9NX00 188 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 FAM32AQ9Y421 112 aaKnown RBP11.52□□□□□ -0.57
VCX3A-202ENST00000398729 UGT2A1Q9Y4X1 527 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 ENPP4Q9Y6X5 453 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.57
VCX3A-202ENST00000398729 IGKV1D-43A0A0B4J1Z2 117 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 SNX3O60493 162 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 LMX1BO60663 402 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 TCN1P20061 433 aaPredicted RBP11.51□□□□□ -0.57
VCX3A-202ENST00000398729 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 SRSF2Q01130 221 aaKnown RBP11.51□□□□□ -0.57
VCX3A-202ENST00000398729 SGCAQ16586 387 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 GLYATQ6IB77 296 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 TBPL2Q6SJ96 375 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 TMPRSS11FQ6ZWK6 438 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 PAQR4Q8N4S7 273 aaPredicted RBP11.51□□□□□ -0.57
VCX3A-202ENST00000398729 OR13C2Q8NGS9 318 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 C11orf40Q8WZ69 217 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 NABP1Q96AH0 204 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 TSPAN32Q96QS1 320 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 BCL2L14Q9BZR8 327 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 NDEL1Q9GZM8 345 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 NMNAT1Q9HAN9 279 aaPredicted RBP11.51□□□□□ -0.57
VCX3A-202ENST00000398729 ADA2Q9NZK5 511 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 MYEF2Q9P2K5 600 aaKnown RBP11.51□□□□□ -0.57
VCX3A-202ENST00000398729 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 EGFL7Q9UHF1 273 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 GPR160Q9UJ42 338 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 KCNS2Q9ULS6 477 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 TMEM5Q9Y2B1 443 aa11.51□□□□□ -0.57
VCX3A-202ENST00000398729 LOC100289279A0A1B0GTE1 492 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 LCKP06239 509 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 H1F0P07305 194 aaKnown RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF32P17041 273 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 DRD4P21917 467 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 STOMP27105 288 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 APEX1P27695 318 aaKnown RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 RPL4P36578 427 aaKnown RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 GPR4P46093 362 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 CHN2P52757 468 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 UCP2P55851 309 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 KLF3P57682 345 aaPredicted RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 FHL1Q13642 323 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 MAD2L1BPQ15013 274 aaPredicted RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 NKPD1Q17RQ9 610 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms