RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TXNIPQ9H3M7 391 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 SIPA1L1O43166 1804 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 TRBV5-3A0A0A0MS03 114 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 HSPB2A8KAH6 182 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF814B7Z6K7 855 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 F10P00742 488 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 TK1P04183 234 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZIC1Q15915 447 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 HSPB2Q16082 182 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 PRTGQ2VWP7 1150 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 CLVS2Q5SYC1 327 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 LCN10Q6JVE6 187 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 C8orf82Q6P1X6 216 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 TMPRSS11FQ6ZWK6 438 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 RAB11FIP2Q7L804 512 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR9K2Q8NGE7 335 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 CALHM2Q9HA72 323 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 K7EQS6 105 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 SULT1C4O75897 302 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 CHRM2P08172 466 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 CAMLGP49069 296 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 EIF5A2Q9GZV4 153 aaKnown RBP12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 WWTR1Q9GZV5 400 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 IFNA2P01563 188 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 PTPN6P29350 595 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 TGFBR1P36897 503 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 RNF4P78317 190 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 ASAH1Q13510 395 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 COMMD7Q86VX2 200 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF679Q8IYX0 411 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR4N2Q8NGD1 307 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 MRGPRX4Q96LA9 322 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 TSSK2Q96PF2 358 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 A0A087WUJ7 227 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 PLSCR5A0PG75 271 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 SLC34A2O95436 690 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 ELK1P19419 428 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 SUMO3P55854 103 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 RHEBQ15382 184 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 MEX3BQ6ZN04 569 aaKnown RBP12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 PSMF1Q92530 271 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
PCDHGA11-201ENST00000398587 PRSS37A4D1T9 235 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF705EA8MWA4 302 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 GABARAPH6UMI1 98 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 CTF1Q16619 201 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF628Q5EBL2 1059 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF546Q86UE3 836 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 SIRT6Q8N6T7 355 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 STK35Q8TDR2 534 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 SLC25A21Q9BQT8 299 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 TWSG1Q9GZX9 223 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 RGCCQ9H4X1 137 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 ACKR4Q9NPB9 350 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 PCDHGA1Q9Y5H4 931 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 LOC107986453A0A1B0GWG9 222 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 SOD1P00441 154 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 BTG1P62324 171 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 EGR3Q06889 387 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 GPNMBQ14956 572 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 PRR18Q8N4B5 295 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 FCRL1Q96LA6 429 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 DCLRE1CQ96SD1 692 aaKnown RBP12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 S1PR5Q9H228 398 aa12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA11-201ENST00000398587 BPNT1O95861 308 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC2A1P11166 492 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 MSR1P21757 451 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 IL10RAQ13651 578 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR1N1Q8NGS0 311 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 RNF128Q8TEB7 428 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 ARL11Q969Q4 196 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 THOC3Q96J01 351 aaKnown RBP12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 NUDT9Q9BW91 350 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 LHX6Q9UPM6 363 aa12.96□□□□□ -0.34
PCDHGA11-201ENST00000398587 A0A0B4J2E0 115 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 A0A1B0GX12 115 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 A0A1W2PNR3 127 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 NRG2O14511 850 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 IFNA1P01562 189 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 GPR85P60893 370 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 FCN2Q15485 313 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 THEM4Q5T1C6 240 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF585AQ6P3V2 769 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 ANGPTL5Q86XS5 388 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR5M1Q8NGP8 315 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 IP6K3Q96PC2 410 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 MED18Q9BUE0 208 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 GALNT9Q9HCQ5 603 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 E9PI62 339 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 MBTPS2O43462 519 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR2J2O76002 312 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 TRAPPC2P0DI81 140 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 TRAPPC2BP0DI82 140 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms