RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 OPN4Q9UHM6 478 aa10.24□□□□□ -0.77
TFF3-202ENST00000398431 WIPI2Q9Y4P8 454 aa10.24□□□□□ -0.77
TFF3-202ENST00000398431 MGAM2Q2M2H8 2515 aa10.24□□□□□ -0.77
TFF3-202ENST00000398431 IGHV1-69-2A0A0G2JMI3 117 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 SLC22A2O15244 555 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 CHP2O43745 196 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 OR6A2O95222 327 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 SNAP29O95721 258 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 FSHBP01225 129 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 IGHV2-5P01817 119 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 LCKP06239 509 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 RPSAP08865 295 aaKnown RBP10.23□□□□□ -0.77
TFF3-202ENST00000398431 ASAH2BP0C7U1 165 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 ADRA2CP18825 462 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 KLF3P57682 345 aaPredicted RBP10.23□□□□□ -0.77
TFF3-202ENST00000398431 STX1BP61266 288 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 RBBP4Q09028 425 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 TUSC1Q2TAM9 212 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 PCGF3Q3KNV8 242 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 MMEL1Q495T6 779 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 ENTPD8Q5MY95 495 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 TMEM154Q6P9G4 183 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 RANBP3LQ86VV4 465 aaPredicted RBP10.23□□□□□ -0.77
TFF3-202ENST00000398431 C11orf40Q8WZ69 217 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 MCHR2Q969V1 340 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 ZNF566Q969W8 418 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 CMTM5Q96DZ9 223 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 ZNF347Q96SE7 839 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 SEPHS2Q99611 448 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 CPPED1Q9BRF8 314 aaPredicted RBP10.23□□□□□ -0.77
TFF3-202ENST00000398431 ZNF426Q9BUY5 554 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 RBM4Q9BWF3 364 aaKnown RBP10.23□□□□□ -0.77
TFF3-202ENST00000398431 CADM1Q9BY67 442 aaKnown RBP10.23□□□□□ -0.77
TFF3-202ENST00000398431 MRPL13Q9BYD1 178 aaKnown RBP10.23□□□□□ -0.77
TFF3-202ENST00000398431 RNF121Q9H920 327 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 CDH20Q9HBT6 801 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 MRGBPQ9NV56 204 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 SLCO1C1Q9NYB5 712 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 GPR160Q9UJ42 338 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 LRRC42Q9Y546 428 aa10.23□□□□□ -0.77
TFF3-202ENST00000398431 CPSF4LA6NMK7 179 aaKnown RBP10.22□□□□□ -0.77
TFF3-202ENST00000398431 RNF13O43567 381 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 IGHV3-13P01766 116 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 OPN1SWP03999 348 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 VHLP40337 213 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 RAD52P43351 418 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 ZNF133P52736 654 aaPredicted RBP10.22□□□□□ -0.77
TFF3-202ENST00000398431 SELENOVP59797 346 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 SLC34A1Q06495 639 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 SCGB2A2Q13296 93 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 SELPLGQ14242 412 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 TSTQ16762 297 aaKnown RBP10.22□□□□□ -0.77
TFF3-202ENST00000398431 NRN1LQ496H8 165 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 AWAT1Q58HT5 328 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 TMEM53Q6P2H8 277 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 TTC33Q6PID6 262 aaPredicted RBP10.22□□□□□ -0.77
TFF3-202ENST00000398431 USP51Q70EK9 711 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 SLC16A14Q7RTX9 510 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 DPPA2Q7Z7J5 298 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 TREML1Q86YW5 311 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 ADAMTS16Q8TE57 1224 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 ZMYND19Q96E35 227 aaPredicted RBP10.22□□□□□ -0.77
TFF3-202ENST00000398431 SLC6A7Q99884 636 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 PRSS27Q9BQR3 290 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 BCL2L14Q9BZR8 327 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 MEPEQ9NQ76 525 aaPredicted RBP10.22□□□□□ -0.77
TFF3-202ENST00000398431 NANSQ9NR45 359 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 TAS2R1Q9NYW7 299 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 ARMCX1Q9P291 453 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 SLC13A4Q9UKG4 626 aa10.22□□□□□ -0.77
TFF3-202ENST00000398431 A0A0G2JMP0 313 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 A0A0X1KG70 313 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 EVPLLA8MZ36 301 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 J3QLI3 93 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 FKBP6O75344 327 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 FARS2O95363 451 aaKnown RBP10.21□□□□□ -0.77
TFF3-202ENST00000398431 BCL10O95999 233 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 IGHV1-46P01743 117 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 MAKP20794 623 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 CD247P20963 164 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 PRDX6P30041 224 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 LIMS1P48059 325 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 MMP15P51511 669 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 TEKQ02763 1124 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 GLO1Q04760 184 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 KLF10Q13118 480 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 HNRNPA0Q13151 305 aaKnown RBP10.21□□□□□ -0.77
TFF3-202ENST00000398431 TBC1D28Q2M2D7 210 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 SLC36A2Q495M3 483 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 AGKQ53H12 422 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 SPRNQ5BIV9 151 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 LRRC18Q8N456 261 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 TEX29Q8N6K0 151 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 OR4M2Q8NGB6 313 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 OR1J2Q8NGS2 313 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 OR1J1Q8NGS3 322 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 NANPQ8TBE9 248 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 SNX33Q8WV41 574 aa10.21□□□□□ -0.77
TFF3-202ENST00000398431 DVL3Q92997 716 aaPredicted RBP10.21□□□□□ -0.77
TFF3-202ENST00000398431 NMD3Q96D46 503 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms