RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 P2RX4Q99571 388 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 SLC29A1Q99808 456 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 LZTS2Q9BRK4 669 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 MTG1Q9BT17 334 aaPredicted RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 C20orf24Q9BUV8 137 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 GABARAPL3Q9BY60 117 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 FAM192AQ9GZU8 254 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 CLMPQ9H6B4 373 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 AUNIPQ9H7T9 357 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 NTN4Q9HB63 628 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 LGALS13Q9UHV8 139 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 PITPNC1Q9UKF7 332 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 IGLV11-55A0A075B6I3 123 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 TRBV6-6A0A0A6YYG2 114 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 SERTM2A0A1B0GWG4 89 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 PRSS37A4D1T9 235 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 A6NDX4 124 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 LRRIQ3A6PVS8 624 aaPredicted RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 DFNA5O60443 496 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 KLHL41O60662 606 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 SRP72O76094 671 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 AQP8O94778 261 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 FGF4P08620 206 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 CCNB1P14635 433 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 CXCL5P42830 114 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 SLC1A1P43005 524 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 SYKP43405 635 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 CX3CR1P49238 355 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 MRPL19P49406 292 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 ZNF136P52737 540 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 SLC25A11Q02978 314 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 MECOMQ03112 1051 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 MERTKQ12866 999 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 SELENBP1Q13228 472 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 MAB21L1Q13394 359 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 CAPRIN1Q14444 709 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 ALKBH6Q3KRA9 238 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 ANKRD22Q5VYY1 191 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 ANKRD26P1Q6NSI1 321 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 REEP3Q6NUK4 255 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 CENPQQ7L2Z9 268 aaPredicted RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 STRADAQ7RTN6 431 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 HDDC2Q7Z4H3 204 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 MREGQ8N565 214 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 C15orf56Q8N910 161 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 Q8N9W7 124 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 NOXO1Q8NFA2 376 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 OR10G4Q8NGN3 311 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 OR10J6PQ8NGY7 276 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 OR4S2Q8NH73 311 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 GEMIN6Q8WXD5 167 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 PANX1Q96RD7 426 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 SLC25A39Q9BZJ4 359 aaPredicted RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 CDC42EP4Q9H3Q1 356 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 NCOR1P1Q9H4R4 102 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 RPF2Q9H7B2 306 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 LYARQ9NX58 379 aaKnown RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 UXTQ9UBK9 157 aaPredicted RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 PCYOX1Q9UHG3 505 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 CD84Q9UIB8 345 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 NEU3Q9UQ49 428 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 CAB39Q9Y376 341 aaPredicted RBP1.74□□□□□ -2.13
CD47-203ENST00000398258 HEBP2Q9Y5Z4 205 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 KCNE3Q9Y6H6 103 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 WSB1Q9Y6I7 421 aa1.74□□□□□ -2.13
CD47-203ENST00000398258 ASTN1O14525 1302 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 NFASCO94856 1347 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 KCNE1BA0A087WTH5 132 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 HIDE1A8MVS5 230 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 H0YIV9 168 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 AIM2O14862 343 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 SCAMP2O15127 329 aaKnown RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 EIF4E2O60573 245 aaKnown RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 CA11O75493 328 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CLIC3O95833 236 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 SERPINA5P05154 406 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 SERPINE2P07093 398 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ASGR1P07306 291 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ANXA5P08758 320 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CT45A6P0DMU7 189 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CT45A5P0DMU8 189 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CT45A7P0DMV0 189 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ANXA8P13928 327 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 STOMP27105 288 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 NAMPTP43490 491 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CDKN1BP46527 198 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 SLC7A9P82251 487 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 MXD1Q05195 221 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 LIPEQ05469 1076 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 SMARCB1Q12824 385 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ECH1Q13011 328 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 IL18Q14116 193 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ZBED5Q49AG3 693 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 XKR4Q5GH76 650 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CT45A1Q5HYN5 189 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ANXA8L1Q5VT79 327 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 Q6P435 159 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ZNF493Q6ZR52 646 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ABHD13Q7L211 337 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms