RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 C10orf105Q8TEF2 133 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 NMD3Q96D46 503 aaKnown RBP12.04□□□□□ -0.48
SEC13-204ENST00000397099 DHRS1Q96LJ7 313 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 TNFRSF13CQ96RJ3 184 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 CCT8L2Q96SF2 557 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 SH3GL3Q99963 347 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 PIMREGQ9BSJ6 248 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 BCL2L14Q9BZR8 327 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 MUC13Q9H3R2 512 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 SEC61A2Q9H9S3 476 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 CDH20Q9HBT6 801 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 DYNLRB1Q9NP97 96 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
SEC13-204ENST00000397099 ZNF346Q9UL40 294 aaKnown RBP12.04□□□□□ -0.48
SEC13-204ENST00000397099 AURKCQ9UQB9 309 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 ABCA1O95477 2261 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 FN1P02751 2386 aaKnown RBP12.03□□□□□ -0.48
SEC13-204ENST00000397099 IGHV4-30-2A0A087WSY4 118 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 TRAV27A0A087WT01 109 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 NDUFB2O95178 105 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 CST2P09228 141 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 APLNRP35414 380 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 GYS2P54840 703 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 VLDLRP98155 873 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 MYBPC1Q00872 1141 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 HSF2Q03933 536 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
SEC13-204ENST00000397099 PODNL1Q6PEZ8 512 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 ADCK1Q86TW2 530 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 LINC00471Q8N535 108 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 ZNF525Q8N782 197 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 RNF148Q8N7C7 305 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 ZNF519Q8TB69 540 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 HDAC2Q92769 488 aaKnown RBP12.03□□□□□ -0.48
SEC13-204ENST00000397099 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 SORCS2Q96PQ0 1159 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 GPX7Q96SL4 187 aaPredicted RBP12.03□□□□□ -0.48
SEC13-204ENST00000397099 IL1RAPQ9NPH3 570 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
SEC13-204ENST00000397099 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 C12orf71A8MTZ7 269 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 KIAA1324LA8MWY0 1029 aaPredicted RBP12.02□□□□□ -0.49
SEC13-204ENST00000397099 M0R233 179 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 CD5LO43866 347 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 KRT36O76013 467 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 GADD45GO95257 159 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 FABP3P05413 133 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 MMP7P09237 267 aaPredicted RBP12.02□□□□□ -0.49
SEC13-204ENST00000397099 APEHP13798 732 aaKnown RBP12.02□□□□□ -0.49
SEC13-204ENST00000397099 TCN1P20061 433 aaPredicted RBP12.02□□□□□ -0.49
SEC13-204ENST00000397099 USF1P22415 310 aaPredicted RBP12.02□□□□□ -0.49
SEC13-204ENST00000397099 SDHAP31040 664 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 GPR4P46093 362 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 FHL1Q13642 323 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 ARL9Q6T311 187 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 UGT2A3Q6UWM9 527 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 FOXL2NBQ6ZUU3 175 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 ZNF584Q8IVC4 421 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 DEFB107AQ8IZN7 70 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 SVOPLQ8N434 492 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 CCDC197Q8NCU1 140 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 OR13C2Q8NGS9 318 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 HTRA1Q92743 480 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 NSL1Q96IY1 281 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 ZNF570Q96NI8 536 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 TSPAN32Q96QS1 320 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 ARL8BQ9NVJ2 186 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 SLCO1C1Q9NYB5 712 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 ACTR3BQ9P1U1 418 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 EIF3KQ9UBQ5 218 aaKnown RBP12.02□□□□□ -0.49
SEC13-204ENST00000397099 TIMM10BQ9Y5J6 103 aa12.02□□□□□ -0.49
SEC13-204ENST00000397099 CHD3Q12873 2000 aaKnown RBP12.01□□□□□ -0.49
SEC13-204ENST00000397099 TMEM129A0AVI4 362 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 H3BSA7 217 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 CDC42EP2O14613 210 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 ARPC2O15144 300 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 PTP4A3O75365 173 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 SLC2A10O95528 541 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 MT-ND5P03915 603 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 HOXB6P17509 224 aaKnown RBP12.01□□□□□ -0.49
SEC13-204ENST00000397099 MSR1P21757 451 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 CALB2P22676 271 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 TUBG1P23258 451 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 OMPP47874 163 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 LIMS1P48059 325 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 RPS6KA3P51812 740 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 UCP2P55851 309 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 MRPS11P82912 194 aaKnown RBP12.01□□□□□ -0.49
SEC13-204ENST00000397099 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 SGCAQ16586 387 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 RGS7BPQ6MZT1 257 aaPredicted RBP12.01□□□□□ -0.49
SEC13-204ENST00000397099 PGM2L1Q6PCE3 622 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 TBPL2Q6SJ96 375 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 SMARCD3Q6STE5 483 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 DPY19L2P2Q6ZN68 376 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 TSEN54Q7Z6J9 526 aaKnown RBP12.01□□□□□ -0.49
SEC13-204ENST00000397099 LRRC18Q8N456 261 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 FITM2Q8N6M3 262 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 C11orf40Q8WZ69 217 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms