RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 NDRG4Q9ULP0 352 aaKnown RBP9.03□□□□□ -0.96
NEDD8-202ENST00000396828 BAIAP2Q9UQB8 552 aa9.03□□□□□ -0.96
NEDD8-202ENST00000396828 SIGLEC7Q9Y286 467 aa9.03□□□□□ -0.96
NEDD8-202ENST00000396828 TRAPPC4Q9Y296 219 aa9.03□□□□□ -0.96
NEDD8-202ENST00000396828 NOSIPQ9Y314 301 aaKnown RBP9.03□□□□□ -0.96
NEDD8-202ENST00000396828 CORINQ9Y5Q5 1042 aa9.03□□□□□ -0.96
NEDD8-202ENST00000396828 CIB4A0PJX0 185 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 ZAR1LA6NP61 321 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 RNF212BA8MTL3 300 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 LRRN3E7EW58 273 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 BLOC1S5-TXNDC5H3BN57 136 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 M0R1B8 84 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 TLX2O43763 284 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-202ENST00000396828 MPZL2O60487 215 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 PTP4A3O75365 173 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 PMS2P2O95744 297 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 MYF6P23409 242 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 NOS3P29474 1203 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 GRPRP30550 384 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 GGT2P36268 569 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 RPL4P36578 427 aaKnown RBP9.02□□□□□ -0.97
NEDD8-202ENST00000396828 GIPRP48546 466 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 NUDT6P53370 316 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 SLC16A1P53985 500 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 OR2B6P58173 313 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 CSNK2A1P68400 391 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-202ENST00000396828 SLC35A1P78382 337 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 PMS2P3Q13401 168 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 GINS1Q14691 196 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 PDK3Q15120 406 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 TMEM249Q2WGJ8 235 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 CLEC12AQ5QGZ9 265 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 TSPO2Q5TGU0 170 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 ZNF691Q5VV52 312 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 SLC22A25Q6T423 547 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 H1FNTQ75WM6 255 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-202ENST00000396828 P2RY8Q86VZ1 359 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 MUC15Q8N387 334 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 SCAIQ8N9R8 606 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 OR5J2Q8NH18 312 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 FAM81AQ8TBF8 368 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 APH1AQ96BI3 265 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 ZHX1-C8orf76Q96EF9 292 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 SAMD8Q96LT4 415 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 SLC38A2Q96QD8 506 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 PITX2Q99697 317 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 IFT27Q9BW83 186 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 SLC7A10Q9NS82 523 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 CBLN4Q9NTU7 201 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 ASB6Q9NWX5 421 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 MRPL39Q9NYK5 338 aaKnown RBP9.02□□□□□ -0.97
NEDD8-202ENST00000396828 TAS2R16Q9NYV7 291 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 HIF3AQ9Y2N7 669 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 HSPE1-MOB4S4R3N1 261 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 ARFGEF3Q5TH69 2177 aa9.02□□□□□ -0.97
NEDD8-202ENST00000396828 LIPT2A6NK58 231 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 A8MV72 311 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-202ENST00000396828 FTCDNL1E5RQL4 147 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 EIF1BO60739 113 aaKnown RBP9.01□□□□□ -0.97
NEDD8-202ENST00000396828 CLIC3O95833 236 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 HMGN1P05114 100 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 IGFBP1P08833 259 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-202ENST00000396828 GNAO1P09471 354 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 ADORA3P0DMS8 318 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 PTAFRP25105 342 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 EPHA2P29317 976 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 FABP6P51161 128 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 CDK5Q00535 292 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 SRSF2Q01130 221 aaKnown RBP9.01□□□□□ -0.97
NEDD8-202ENST00000396828 IL5RAQ01344 420 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 ALG10Q5BKT4 473 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 MALRD1Q5VYJ5 2156 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 SLX4IPQ5VYV7 408 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 TMEM236Q5W0B7 351 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 TMEM108Q6UXF1 575 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 DPY19L2P2Q6ZN68 376 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 USP51Q70EK9 711 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 THAP5Q7Z6K1 395 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 ARIH2OSQ8N7S6 290 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 ZIC4Q8N9L1 334 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 PLEKHA8Q96JA3 519 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 RHNO1Q9BSD3 238 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 NAA11Q9BSU3 229 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-202ENST00000396828 PLA2G12AQ9BZM1 189 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 BARX1Q9HBU1 254 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-202ENST00000396828 SLC25A19Q9HC21 320 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 FAIMQ9NVQ4 179 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 EMC3Q9P0I2 261 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 MALT1Q9UDY8 824 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 IL20RAQ9UHF4 553 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 POU2F3Q9UKI9 436 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 FLVCR1Q9Y5Y0 555 aa9.01□□□□□ -0.97
NEDD8-202ENST00000396828 M0R082 166 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 PLPP3O14495 311 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 RNF13O43567 381 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 DNPH1O43598 174 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 IDH3BO43837 385 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 MRPL33O75394 65 aaKnown RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 IFNGP01579 166 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 AHCYP23526 432 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms