RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 GAAP10253 952 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ZNF250P15622 560 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 STOMP27105 288 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ZNF81P51508 661 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ACTG1P63261 375 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ST3GAL3Q11203 375 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 FAM205BPQ63HN1 556 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 NANOGP8Q6NSW7 305 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 NHLRC1Q6VVB1 395 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 WDR88Q6ZMY6 472 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 RRM2BQ7LG56 351 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 RETREG3Q86VR2 466 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 OR4M2Q8NGB6 313 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ZFAND2BQ8WV99 257 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ZNF75AQ96N20 296 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ZNF347Q96SE7 839 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 WFDC6Q9BQY6 131 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ELOVL3Q9HB03 270 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 ZNF224Q9NZL3 707 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 CGGBP1Q9UFW8 167 aaPredicted RBP14.03□□□□□ -0.16
DDR1-229ENST00000396342 AP3M1Q9Y2T2 418 aa14.03□□□□□ -0.16
DDR1-229ENST00000396342 PNPP00491 289 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 CCL2P13500 99 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 ITGA2P17301 1181 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 AQP2P41181 271 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 MRPS34P82930 218 aaKnown RBP14.02□□□□□ -0.17
DDR1-229ENST00000396342 MVKQ03426 396 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 SELPLGQ14242 412 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 LRRC23Q53EV4 343 aaPredicted RBP14.02□□□□□ -0.17
DDR1-229ENST00000396342 ALG10Q5BKT4 473 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 TTMPQ5BVD1 217 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 COQ5Q5HYK3 327 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 PABPC1L2AQ5JQF8 200 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 ASB10Q8WXI3 467 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 NSMAFQ92636 917 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 LRRC58Q96CX6 371 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 TPD52L3Q96J77 140 aa14.02□□□□□ -0.17
DDR1-229ENST00000396342 ISPDA4D126 451 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 C5orf49A4QMS7 147 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 A6NIZ1 184 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 TRIM77I1YAP6 450 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 MRASO14807 208 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 EDF1O60869 148 aaKnown RBP14.01□□□□□ -0.17
DDR1-229ENST00000396342 TRMUO75648 421 aaKnown RBP14.01□□□□□ -0.17
DDR1-229ENST00000396342 TNFSF4P23510 183 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 CRYBB2P43320 205 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 MAGEB1P43366 347 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 UGT2B15P54855 530 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 RAP1BP61224 184 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 RAP1AP62834 184 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 SRSF2Q01130 221 aaKnown RBP14.01□□□□□ -0.17
DDR1-229ENST00000396342 TOP3AQ13472 1001 aaPredicted RBP14.01□□□□□ -0.17
DDR1-229ENST00000396342 TSTQ16762 297 aaKnown RBP14.01□□□□□ -0.17
DDR1-229ENST00000396342 THEM4Q5T1C6 240 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 USP51Q70EK9 711 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 ZNF584Q8IVC4 421 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 ST7LQ8TDW4 575 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 TMEM255BQ8WV15 326 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 DIRC2Q96SL1 478 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 GAL3ST1Q99999 423 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 ZNF426Q9BUY5 554 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 ALG12Q9BV10 488 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 FNDC11Q9BVV2 318 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 RSPO3Q9BXY4 272 aaPredicted RBP14.01□□□□□ -0.17
DDR1-229ENST00000396342 TXNIPQ9H3M7 391 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 ZNF665Q9H7R5 613 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 VIPAS39Q9H9C1 493 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 MYEF2Q9P2K5 600 aaKnown RBP14.01□□□□□ -0.17
DDR1-229ENST00000396342 TIMM10BQ9Y5J6 103 aa14.01□□□□□ -0.17
DDR1-229ENST00000396342 IGLV3-9A0A075B6K5 115 aa14□□□□□ -0.17
DDR1-229ENST00000396342 NPIPB13A6NJU9 1138 aa14□□□□□ -0.17
DDR1-229ENST00000396342 C12orf71A8MTZ7 269 aa14□□□□□ -0.17
DDR1-229ENST00000396342 NPIPB4C9JG80 1138 aa14□□□□□ -0.17
DDR1-229ENST00000396342 GSTA4O15217 222 aa14□□□□□ -0.17
DDR1-229ENST00000396342 MPZL1O95297 269 aa14□□□□□ -0.17
DDR1-229ENST00000396342 CLPTM1O96005 669 aa14□□□□□ -0.17
DDR1-229ENST00000396342 GSTM3P21266 225 aa14□□□□□ -0.17
DDR1-229ENST00000396342 GATA3P23771 443 aa14□□□□□ -0.17
DDR1-229ENST00000396342 ARFIP2P53365 341 aa14□□□□□ -0.17
DDR1-229ENST00000396342 GLO1Q04760 184 aa14□□□□□ -0.17
DDR1-229ENST00000396342 PIN1Q13526 163 aaPredicted RBP14□□□□□ -0.17
DDR1-229ENST00000396342 HIST3H3Q16695 136 aa14□□□□□ -0.17
DDR1-229ENST00000396342 ANKDD1AQ495B1 522 aa14□□□□□ -0.17
DDR1-229ENST00000396342 C10orf128Q5T292 105 aa14□□□□□ -0.17
DDR1-229ENST00000396342 RBMS3Q6XE24 437 aaKnown RBP14□□□□□ -0.17
DDR1-229ENST00000396342 PFN4Q8NHR9 129 aa14□□□□□ -0.17
DDR1-229ENST00000396342 FGFBP3Q8TAT2 258 aa14□□□□□ -0.17
DDR1-229ENST00000396342 CCL17Q92583 94 aa14□□□□□ -0.17
DDR1-229ENST00000396342 SUCNR1Q9BXA5 334 aa14□□□□□ -0.17
DDR1-229ENST00000396342 TMEM120AQ9BXJ8 343 aa14□□□□□ -0.17
DDR1-229ENST00000396342 MEPEQ9NQ76 525 aaPredicted RBP14□□□□□ -0.17
DDR1-229ENST00000396342 PCDHB10Q9UN67 800 aa14□□□□□ -0.17
DDR1-229ENST00000396342 ARFGEF3Q5TH69 2177 aa14□□□□□ -0.17
DDR1-229ENST00000396342 A0A1W2PPL8 197 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 J3QLI3 93 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 XKRYO14609 159 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 SPRY3O43610 288 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 IGHV3-13P01766 116 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 IGFBP1P08833 259 aaPredicted RBP13.99□□□□□ -0.17
DDR1-229ENST00000396342 IFI30P13284 250 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms