RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MGRN1O60291 552 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 AHSA1O95433 338 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 C1QCP02747 245 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 LINC00032P0C843 101 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 GKN3PP0CG01 181 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 UQCRBP14927 111 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 ARRB2P32121 409 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 SOAT1P35610 550 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 RPS5P46782 204 aaKnown RBP11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 HERPUD1Q15011 391 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 MS4A18Q3C1V0 323 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 UGT3A2Q3SY77 523 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 GALNTL6Q49A17 601 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 ATAD3BQ5T9A4 648 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 GPR157Q5UAW9 335 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 MBNL2Q5VZF2 373 aaKnown RBP11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 CARD17Q5XLA6 110 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 KANK2Q63ZY3 851 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 CGB2Q6NT52 195 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 TNFAIP8L2Q6P589 184 aaPredicted RBP11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 ZNF417Q8TAU3 575 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 SLC25A36Q96CQ1 311 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 TXNDC15Q96J42 360 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 PPP3R2Q96LZ3 170 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 ZNF587Q96SQ5 575 aaPredicted RBP11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 DUSP26Q9BV47 211 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 EMC6Q9BV81 110 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 GIMAP2Q9UG22 337 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 ZDHHC8Q9ULC8 765 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 TRIM33Q9UPN9 1127 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 FIS1Q9Y3D6 152 aa11.37□□□□□ -0.59
VCPKMT-201ENST00000395859 CENPVL3A0A0U1RRI6 287 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 ERICH4A6NGS2 130 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 AIM2O14862 343 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 PRG2P13727 222 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 MMP9P14780 707 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 MDH2P40926 338 aaKnown RBP11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 MNAT1P51948 309 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 C1DQ13901 141 aaKnown RBP11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 KRT72Q14CN4 511 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 SYPL1Q16563 259 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 WDR88Q6ZMY6 472 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 GDPGP1Q6ZNW5 385 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 ZNF440Q8IYI8 595 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 ZNF101Q8IZC7 436 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 SLC22A24Q8N4F4 322 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 ANKFN1Q8N957 763 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 TWIST2Q8WVJ9 160 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 TAAR8Q969N4 342 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 THOC1Q96FV9 657 aaKnown RBP11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 SLC41A3Q96GZ6 507 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 TRNT1Q96Q11 434 aaKnown RBP11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 SORT1Q99523 831 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 ARHGDIGQ99819 225 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 CCDC28BQ9BUN5 200 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 C1orf198Q9H425 327 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 CDH20Q9HBT6 801 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 CYSLTR2Q9NS75 346 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 FBLN5Q9UBX5 448 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 CHST2Q9Y4C5 530 aa11.36□□□□□ -0.59
VCPKMT-201ENST00000395859 GRPRP30550 384 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 LIPAP38571 399 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 WNT5AP41221 380 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 FGF12P61328 243 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 CDK5R2Q13319 367 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 LARS2Q15031 903 aaKnown RBP11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 MAPK11Q15759 364 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 XKR7Q5GH72 579 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 LRRC74BQ6ZQY2 392 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 H1FNTQ75WM6 255 aaPredicted RBP11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 CADM2Q8N3J6 435 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 OR1J1Q8NGS3 322 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 NUDT16L1Q9BRJ7 211 aaKnown RBP11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 ULBP2Q9BZM5 246 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 MTHFD2LQ9H903 347 aaPredicted RBP11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 TMEM165Q9HC07 324 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 A4GALTQ9NPC4 353 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 B3GAT2Q9NPZ5 323 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 CGGBP1Q9UFW8 167 aaPredicted RBP11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 PCLOQ9Y6V0 5065 aa11.35□□□□□ -0.59
VCPKMT-201ENST00000395859 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 A0A0G2JND7 137 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 PLSCR5A0PG75 271 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 RNASET2O00584 256 aaKnown RBP11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 PRPS1L1P21108 318 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 BNIP1Q12981 228 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 TBC1D28Q2M2D7 210 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 GPAT3Q53EU6 434 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 THEM4Q5T1C6 240 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 ZCCHC23Q6ZST2 131 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 KLBQ86Z14 1044 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 UEVLDQ8IX04 471 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 MUC20Q8N307 709 aaPredicted RBP11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 KLF14Q8TD94 323 aaPredicted RBP11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 ITPKCQ96DU7 683 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 SAMD8Q96LT4 415 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 TBX15Q96SF7 602 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 SH3GL3Q99963 347 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 TMEM120AQ9BXJ8 343 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 NANOGQ9H9S0 305 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms