RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 MS4A18H0YCH9 400 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 ZNF593O00488 134 aaPredicted RBP12.55□□□□□ -0.4
SNCA-204ENST00000394989 SLC16A7O60669 478 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 AHSA1O95433 338 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 HLA-DMAP28067 261 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 SOX2P48431 317 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MMP15P51511 669 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 CLDN12P56749 244 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MS4A18Q3C1V0 323 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 PLA1AQ53H76 456 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 STAC2Q6ZMT1 411 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 ZNF433Q8N7K0 673 aaPredicted RBP12.55□□□□□ -0.4
SNCA-204ENST00000394989 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 SLC25A38Q96DW6 304 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MNTQ99583 582 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MED28Q9H204 178 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 CACNA1CQ13936 2221 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 H3BSH0 61 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 WNT11O96014 354 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 CD3GP09693 182 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 M6PRP20645 277 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 DPP4P27487 766 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 TMEM205Q6UW68 189 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 LRRN1Q6UXK5 716 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 IZUMO1Q8IYV9 350 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 MAML2Q8IZL2 1156 aaPredicted RBP12.54□□□□□ -0.4
SNCA-204ENST00000394989 CMTM4Q8IZR5 234 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 ST8SIA1Q92185 356 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 ZFP3Q96NJ6 502 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 PRMT8Q9NR22 394 aaPredicted RBP12.54□□□□□ -0.4
SNCA-204ENST00000394989 RDH8Q9NYR8 311 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 EIF3KQ9UBQ5 218 aaKnown RBP12.54□□□□□ -0.4
SNCA-204ENST00000394989 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 POM121CA8CG34 1229 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 ORC5O43913 435 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 HLA-DQA2P01906 255 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 CFIP05156 583 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 PTGDSP41222 190 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 KIR3DL2P43630 455 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
SNCA-204ENST00000394989 MEP1BQ16820 701 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 ODF4Q2M2E3 257 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 UBE2NLQ5JXB2 153 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 PRSS45Q7RTY3 260 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.54□□□□□ -0.4
SNCA-204ENST00000394989 C9orf62Q8N4C0 152 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 ZNF671Q8TAW3 534 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 TMEM234Q8WY98 164 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 NSMAFQ92636 917 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 EDAQ92838 391 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 ULBP3Q9BZM4 244 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 LIN7BQ9HAP6 207 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 MYOTQ9UBF9 498 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 TMEM14AQ9Y6G1 99 aa12.54□□□□□ -0.4
SNCA-204ENST00000394989 TRAV8-7A0A075B6U6 113 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 SHOXO15266 292 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 OR2T1O43869 369 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 EFNA2O43921 213 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 CXCL3P19876 107 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 DLX5P56178 289 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 FOXF1Q12946 379 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 TNK1Q13470 666 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 INPP5JQ15735 1006 aaPredicted RBP12.53□□□□□ -0.4
SNCA-204ENST00000394989 PHF19Q5T6S3 580 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 MRPL14Q6P1L8 145 aaKnown RBP12.53□□□□□ -0.4
SNCA-204ENST00000394989 TEX261Q6UWH6 196 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 SLC26A1Q9H2B4 701 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 CACNG2Q9Y698 323 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 U3KQ87 197 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 V9GY05 133 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 A0A0A6YYJ9 748 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 TRIM3O75382 744 aaPredicted RBP12.53□□□□□ -0.4
SNCA-204ENST00000394989 ZNF254O75437 659 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 OR2J2O76002 312 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 OR6A2O95222 327 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 MPZL1O95297 269 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 ZNF28P17035 718 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 WDR38Q5JTN6 314 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 LRRTM1Q86UE6 522 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 DNAAF1Q8NEP3 725 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 OR10G3Q8NGC4 313 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 OR8K3Q8NH51 312 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 OR8B4Q96RC9 309 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 NUDT15Q9NV35 164 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 CAMK2AQ9UQM7 478 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 FREM3P0C091 2139 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 SIGLEC5O15389 551 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 ITGA10O75578 1167 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 CENPAP49450 140 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 PER3P56645 1201 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 PUDPQ08623 228 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 SIGLEC14Q08ET2 396 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 OR7A5Q15622 319 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 CFAP77Q6ZQR2 320 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 NAT6Q93015 286 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms