RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 IFNA2P01563 188 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PET100P0DJ07 73 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 AKR1C4P17516 323 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ABCD3P28288 659 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PRSS3P35030 304 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ALDH3B1P43353 468 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZNF41P51814 821 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 CASP6P55212 293 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 C21orf58P58505 322 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 VAMP2P63027 116 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 KCNAB1Q14722 419 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 MLC1Q15049 377 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZIC1Q15915 447 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 HLA-BQ31612 363 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 TRMT12Q53H54 448 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 SYT14P1Q58G82 188 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 FAM69BQ5VUD6 431 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZNF705AQ6ZN79 300 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 HIST2H3AQ71DI3 136 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 NRMQ8IXM6 262 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZNF383Q8NA42 475 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 OR5M1Q8NGP8 315 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 OR1S2Q8NGQ3 325 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SYNPRQ8TBG9 265 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 LGALS14Q8TCE9 139 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 TMED6Q8WW62 240 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 HGDQ93099 445 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZBTB8AQ96BR9 441 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 FOXRED1Q96CU9 486 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 FAM46AQ96IP4 442 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 KLHL15Q96M94 604 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 OR2A5Q96R48 311 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC6A7Q99884 636 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 CYSLTR2Q9NS75 346 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZNF275Q9NSD4 429 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 ASB6Q9NWX5 421 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 CNIH4Q9P003 139 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC7A7Q9UM01 511 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC35A3Q9Y2D2 325 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 RNF215Q9Y6U7 377 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 DOCK6Q96HP0 2047 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 A0A1B0GX78 115 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 C7orf66A4D0T2 115 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 AP4M1O00189 453 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 FGF17O60258 216 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 EIF1BO60739 113 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 CTSVO60911 334 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 HPXP02790 462 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SFTPBP07988 381 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 CSF1P09603 554 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 AKAIN1P0CW23 69 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 NME2P22392 152 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 EIF1P41567 113 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 GPR4P46093 362 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 HMGN3Q15651 99 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 MAPK14Q16539 360 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ENTPD8Q5MY95 495 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 B3GNTL1Q67FW5 361 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 FAAP20Q6NZ36 180 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PODNL1Q6PEZ8 512 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 RBMS3Q6XE24 437 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZNF793Q6ZN11 406 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PTOV1Q86YD1 416 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 C1orf210Q8IVY1 113 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PUSL1Q8N0Z8 303 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 SNIP1Q8TAD8 396 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 CNRIP1Q96F85 164 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 RHOVQ96L33 236 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 STACQ99469 402 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PHB2Q99623 299 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PRRG4Q9BZD6 226 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 RNF32Q9H0A6 362 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC25A18Q9H1K4 315 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 UBQLN4Q9NRR5 601 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 GPATCH2Q9NW75 528 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 VSX1Q9NZR4 365 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 NTMQ9P121 344 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 HIF3AQ9Y2N7 669 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 KPTNQ9Y664 436 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 KCNMB2Q9Y691 235 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SPTBN2O15020 2390 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 HLA-AP01891 365 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 CPN1P15169 458 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 BCKDHBP21953 392 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC6A8P48029 635 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 LSSP48449 732 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 RBP2P50120 134 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 IDH3GP51553 393 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 RAG2P55895 527 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ACTBP60709 375 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ACTG1P63261 375 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PABPC1L2AQ5JQF8 200 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 RPTNQ6XPR3 784 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 MSRB3Q8IXL7 192 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 LRRC56Q8IYG6 542 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 PRR22Q8IZ63 422 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 IL22RA1Q8N6P7 574 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ZNF283Q8N7M2 679 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 OR2AK2Q8NG84 335 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 OR52B4Q8NGK2 314 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms