RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 UGT2A1Q9Y4X1 527 aa21.44■■□□□ 1.02
LRFN4-202ENST00000393952 A0A1W2PPL8 197 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 J3QRE1 110 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 CDAP32320 146 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 KIR2DL2P43627 348 aaPredicted RBP21.43■■□□□ 1.02
LRFN4-202ENST00000393952 BLVRAP53004 296 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 PER3P56645 1201 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 SPARTQ8N0X7 666 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 CNEP1R1Q8N9A8 125 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 SLC26A10Q8NG04 563 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 RBM24Q9BX46 236 aaKnown RBP21.43■■□□□ 1.02
LRFN4-202ENST00000393952 MARCH7Q9H992 704 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 CRLF2Q9HC73 371 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 GPR35Q9HC97 309 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 SH3BGRL2Q9UJC5 107 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 SNX5Q9Y5X3 404 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 COL6A6A6NMZ7 2263 aa21.43■■□□□ 1.02
LRFN4-202ENST00000393952 KRT33AO76009 404 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 GLI4P10075 376 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 DCKP27707 260 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 LAP3P28838 519 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 HCCSP53701 268 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 HSF2Q03933 536 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 MEP1BQ16820 701 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 RIPPLY2Q5TAB7 128 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 TMEM154Q6P9G4 183 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 OR10H4Q8NGA5 316 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 HTRA1Q92743 480 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 INTS14Q96SY0 518 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 TBX5Q99593 518 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 TTYH2Q9BSA4 534 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 SEC61A2Q9H9S3 476 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 PRSS50Q9UI38 385 aa21.42■■□□□ 1.02
LRFN4-202ENST00000393952 OR6C65A6NJZ3 312 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 TRIM64CA6NLI5 447 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 MRPS14O60783 128 aaKnown RBP21.41■■□□□ 1.02
LRFN4-202ENST00000393952 IGHA1P01876 353 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 SCG5P05408 212 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 TMIGD3P0DMS9 266 aaPredicted RBP21.41■■□□□ 1.02
LRFN4-202ENST00000393952 TIMP3P35625 211 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 MAP2K4P45985 399 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 OR3A2P47893 321 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 ROR2Q01974 943 aaKnown RBP21.41■■□□□ 1.02
LRFN4-202ENST00000393952 VWA1Q6PCB0 445 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 SLC16A9Q7RTY1 509 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 SLC35F2Q8IXU6 374 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 NAXEQ8NCW5 288 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 OR6N2Q8NGY6 317 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 MRPS26Q9BYN8 205 aaKnown RBP21.41■■□□□ 1.02
LRFN4-202ENST00000393952 SCOCQ9UIL1 159 aa21.41■■□□□ 1.02
LRFN4-202ENST00000393952 INTS1Q8N201 2190 aaKnown RBP21.41■■□□□ 1.02
LRFN4-202ENST00000393952 C12orf71A8MTZ7 269 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 IL2RAP01589 272 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 PSKH1P11801 424 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 RPS27P42677 84 aaKnown RBP21.4■■□□□ 1.02
LRFN4-202ENST00000393952 IRF3Q14653 427 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 CEACAM16Q2WEN9 425 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 UBE2J2Q8N2K1 259 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 OR6K3Q8NGY3 331 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 C11orf40Q8WZ69 217 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 CDCA4Q9BXL8 241 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 CLEC2DQ9UHP7 191 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 PCDHGB1Q9Y5G3 927 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 TNFSF13O75888 250 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 CEACAM8P31997 349 aaPredicted RBP21.4■■□□□ 1.02
LRFN4-202ENST00000393952 ETV1P50549 477 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 ZNF84P51523 738 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 TFAP2EQ6VUC0 442 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 FOXL2NBQ6ZUU3 175 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 RFLNBQ8N5W9 214 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 ACBD7Q8N6N7 88 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 ZFP3Q96NJ6 502 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 EMC7Q9NPA0 242 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 UPB1Q9UBR1 384 aa21.4■■□□□ 1.02
LRFN4-202ENST00000393952 EXOSC1Q9Y3B2 195 aaKnown RBP21.4■■□□□ 1.02
LRFN4-202ENST00000393952 ZNF593O00488 134 aaPredicted RBP21.39■■□□□ 1.01
LRFN4-202ENST00000393952 LIMS3P0CW19 117 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 LIMS4P0CW20 117 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 TUBA4AP68366 448 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 ADAM8P78325 824 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 EMX1Q04741 257 aaPredicted RBP21.39■■□□□ 1.01
LRFN4-202ENST00000393952 KCTD8Q6ZWB6 473 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 LHFPL3Q86UP9 236 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 JAM3Q9BX67 310 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 POLE4Q9NR33 117 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 COPS3Q9UNS2 423 aa21.39■■□□□ 1.01
LRFN4-202ENST00000393952 ZNF587BE7ETH6 402 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 HRGP04196 525 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 CRHP06850 196 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 SPARCP09486 303 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 ZNF823P16415 610 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 MYL12AP19105 171 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 ENTPD1P49961 510 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 FOXG1P55316 489 aaPredicted RBP21.38■■□□□ 1.01
LRFN4-202ENST00000393952 ACTC1P68032 377 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 ACTA1P68133 377 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 PMPCAQ10713 525 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 FAPQ12884 760 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 SGCAQ16586 387 aa21.38■■□□□ 1.01
LRFN4-202ENST00000393952 EIF2S3LQ2VIR3 472 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms