RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 POU4F2Q12837 409 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 CORO6Q6QEF8 472 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 LAX1Q8IWV1 398 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ABHD4Q8TB40 342 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 SLC7A6Q92536 515 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 POTEKPQ9BYX7 375 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 DDX28Q9NUL7 540 aaKnown RBP13.37□□□□□ -0.27
MKS1-202ENST00000393119 C14orf119Q9NWQ9 140 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 PAQR5Q9NXK6 330 aaPredicted RBP13.37□□□□□ -0.27
MKS1-202ENST00000393119 NPIPA1Q9UND3 350 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 V9GYH0 126 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 DMXL2Q8TDJ6 3036 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ARGFXA6NJG6 315 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 SULT2B1O00204 365 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 RGS5O15539 181 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 SEC14L5O43304 696 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ICMTO60725 284 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 EDNRAP25101 427 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ACTC1P68032 377 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ACTA1P68133 377 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.37□□□□□ -0.27
MKS1-202ENST00000393119 TBRG1Q3YBR2 411 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ZNF684Q5T5D7 378 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 DMKNQ6E0U4 476 aaPredicted RBP13.37□□□□□ -0.27
MKS1-202ENST00000393119 LRRN1Q6UXK5 716 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 SLC16A9Q7RTY1 509 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 CDC20BQ86Y33 519 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 LINC00346Q8IVM7 164 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 GTPBP8Q8N3Z3 284 aaPredicted RBP13.37□□□□□ -0.27
MKS1-202ENST00000393119 NEIL3Q8TAT5 605 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 TRIM63Q969Q1 353 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 SLC30A2Q9BRI3 323 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 INPP5EQ9NRR6 644 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ALKBH4Q9NXW9 302 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 SLCO1C1Q9NYB5 712 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 A0A0J9YW62 118 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 A0A0X1KG70 313 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 CASKO14936 926 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 PLPP2O43688 288 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 CD63P08962 238 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 SPARCP09486 303 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 DSCR4P56555 118 aaPredicted RBP13.36□□□□□ -0.27
MKS1-202ENST00000393119 SIRPAP78324 504 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 ZMAT1Q5H9K5 638 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 CEP78Q5JTW2 689 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 TMEM225Q6GV28 225 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 CEACAM19Q7Z692 300 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 NOXA1Q86UR1 476 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 DTX3Q8N9I9 347 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 SLC25A46Q96AG3 418 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 TTYH2Q9BSA4 534 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 SRXN1Q9BYN0 137 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 VSX1Q9NZR4 365 aaPredicted RBP13.36□□□□□ -0.27
MKS1-202ENST00000393119 IKZF2Q9UKS7 526 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 CSAG2Q9Y5P2 127 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 MEIOCA2RUB1 952 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 HLA-DPB1P04440 258 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 CDAP32320 146 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 B3GALT5-AS1P59052 145 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 RPS11P62280 158 aaKnown RBP eCLIP13.36□□□□□ -0.27
MKS1-202ENST00000393119 ZNF79Q15937 498 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 LIPNQ5VXI9 398 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 GDPGP1Q6ZNW5 385 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 UTS2BQ765I0 119 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 DTX1Q86Y01 620 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 RAB43Q86YS6 212 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 SUN5Q8TC36 379 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 SGCZQ96LD1 299 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 INTS14Q96SY0 518 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 KCNK17Q96T54 332 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 GON7Q9BXV9 100 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 RNF32Q9H0A6 362 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 ASCL3Q9NQ33 180 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 LAMP5Q9UJQ1 280 aa13.36□□□□□ -0.27
MKS1-202ENST00000393119 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 YES1P07947 543 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 NAT1P18440 290 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 ALOX5APP20292 161 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 TNFSF8P32971 234 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 GDI2P50395 445 aaKnown RBP13.35□□□□□ -0.27
MKS1-202ENST00000393119 RORCP51449 518 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 SUCLG1P53597 346 aaKnown RBP13.35□□□□□ -0.27
MKS1-202ENST00000393119 ZP4Q12836 540 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 CDK5R1Q15078 307 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 ACSM3Q53FZ2 586 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 TMPPEQ6ZT21 453 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 YIPF7Q8N8F6 280 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 OR10AC1Q8NH08 325 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 OR14L1PQ8NHC6 308 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 RGP1Q92546 391 aaPredicted RBP13.35□□□□□ -0.27
MKS1-202ENST00000393119 DMRTB1Q96MA1 342 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 WDFY2Q96P53 400 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 SMURF1Q9HCE7 757 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 MOKQ9UQ07 419 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms