RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SIRPAP78324 504 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 POU4F2Q12837 409 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 DAZAP2Q15038 168 aaPredicted RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 RNLSQ5VYX0 342 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 IQCF1Q8N6M8 205 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 APH1BQ8WW43 257 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 RIBC2Q9H4K1 309 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 NPDC1Q9NQX5 325 aaPredicted RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 FKBP14Q9NWM8 211 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 SLC25A15Q9Y619 301 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 OR5H1A6NKK0 313 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 C16orf97H3BN30 126 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 CLEC12AQ5QGZ9 265 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 SLC22A24Q8N4F4 322 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 OR4K13Q8NH42 304 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 CA5BP1Q8WTZ4 195 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 DACH2Q96NX9 599 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 NUAK2Q9H093 628 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 C12orf49Q9H741 205 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 IL20RAQ9UHF4 553 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 PRR23D1E9PI22 279 aaPredicted RBP11.62□□□□□ -0.55
USP44-202ENST00000393091 UBL3O95164 117 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 PRR23D2P0DMB1 279 aaPredicted RBP11.62□□□□□ -0.55
USP44-202ENST00000393091 PIPP12273 146 aaPredicted RBP11.62□□□□□ -0.55
USP44-202ENST00000393091 BMP5P22003 454 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 AQP4P55087 323 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 IL1RL1Q01638 556 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 HSF2Q03933 536 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 ENDOGQ14249 297 aaKnown RBP11.62□□□□□ -0.55
USP44-202ENST00000393091 MAD2L1BPQ15013 274 aaPredicted RBP11.62□□□□□ -0.55
USP44-202ENST00000393091 CEACAM16Q2WEN9 425 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 LCN1P1Q5VSP4 162 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 TMEM236Q5W0B7 351 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 MEPCEQ7L2J0 689 aaKnown RBP11.62□□□□□ -0.55
USP44-202ENST00000393091 CXXC5Q7LFL8 322 aaKnown RBP11.62□□□□□ -0.55
USP44-202ENST00000393091 TIGD4Q8IY51 512 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 OR6N1Q8NGY5 312 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 ITFG2Q969R8 447 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 GMPPBQ9Y5P6 360 aa11.62□□□□□ -0.55
USP44-202ENST00000393091 ZG16O60844 167 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 SLC2A10O95528 541 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 OR8G3PP0DMU2 310 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 MSR1P21757 451 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 GLO1Q04760 184 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 LGALS3BPQ08380 585 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 TOP3AQ13472 1001 aaPredicted RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 SDR9C7Q8NEX9 313 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 Q96MT0 163 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 SYT4Q9H2B2 425 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 SLC22A31A6NKX4 558 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 DCTN6O00399 190 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 ARF1P84077 181 aaKnown RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 SNAPC1Q16533 368 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 RFKQ969G6 155 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 ZNF582Q96NG8 517 aaPredicted RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 C1orf198Q9H425 327 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 MRPL22Q9NWU5 206 aaKnown RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 CYB5R1Q9UHQ9 305 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 LRRC42Q9Y546 428 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 WBP4O75554 376 aaKnown RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 NOS3P29474 1203 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 FAPQ12884 760 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 FBXW10Q5XX13 1052 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 FAM222BQ8WU58 562 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 ZNF837Q96EG3 531 aaPredicted RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 ZNF184Q99676 751 aaPredicted RBP11.61□□□□□ -0.55
USP44-202ENST00000393091 HCAR1Q9BXC0 346 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 YIPF3Q9GZM5 350 aa11.61□□□□□ -0.55
USP44-202ENST00000393091 SCG5P05408 212 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 CBR1P16152 277 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 LOXP28300 417 aaPredicted RBP11.6□□□□□ -0.55
USP44-202ENST00000393091 ARR3P36575 388 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 PCBD1P61457 104 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 FMODQ06828 376 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 PSMG3-AS1Q96PY0 264 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 TEAD3Q99594 435 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 TVP23BQ9NYZ1 205 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 SH3BGRL2Q9UJC5 107 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 TRIM64A6NGJ6 449 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 WNT11O96014 354 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 THBDP07204 575 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 RNF224P0DH78 156 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 AQP6Q13520 282 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 TBRG1Q3YBR2 411 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 LAIR2Q6ISS4 152 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 ZNRF4Q8WWF5 429 aa11.6□□□□□ -0.55
USP44-202ENST00000393091 RPRD1BQ9NQG5 326 aaKnown RBP11.6□□□□□ -0.55
USP44-202ENST00000393091 DDX28Q9NUL7 540 aaKnown RBP11.6□□□□□ -0.55
USP44-202ENST00000393091 ESPL1Q14674 2120 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 J3QW42 95 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 SLC16A7O60669 478 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 TFP02787 698 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 CRYGSP22914 178 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 FOXG1P55316 489 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 SLC16A9Q7RTY1 509 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 CDC20BQ86Y33 519 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 CPOQ8IVL8 374 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms