RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 PLCZ1Q86YW0 608 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SIAH3Q8IW03 269 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 UBALD2Q8IYN6 164 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF676Q8N7Q3 588 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 AKR7LQ8NHP1 331 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 THEM6Q8WUY1 208 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 METTL21AQ8WXB1 218 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 RBPMSQ93062 196 aaKnown RBP8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SLC25A36Q96CQ1 311 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 KTI12Q96EK9 354 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-204ENST00000392003 NUDT9Q9BW91 350 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 NRSN2Q9GZP1 204 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 CDCP1Q9H5V8 836 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 CCDC86Q9H6F5 360 aaKnown RBP8.74□□□□□ -1.01
COL6A3-204ENST00000392003 ING4Q9UNL4 249 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 TVP23AA6NH52 213 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 C11orf98E9PRG8 122 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 PHYHO14832 338 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 EIF4E2O60573 245 aaKnown RBP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF432O94892 652 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ASAH2BP0C7U1 165 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 KCNJ3P48549 501 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 SRP9P49458 86 aaKnown RBP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 GZMKP49863 264 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 AP3S2P59780 193 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 DGCR2P98153 550 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 PLA1AQ53H76 456 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 LINC01590Q5TEZ4 76 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 PRAMEF17Q5VTA0 474 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 LIPNQ5VXI9 398 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 APOOLQ6UXV4 268 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 C17orf82Q86X59 251 aaPredicted RBP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 NSMAFQ92636 917 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 TRAV36DV7A0A075B6V5 113 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 IGHV1OR21-1A0A087WYE8 117 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ANKRD61A6NGH8 418 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 IDSB3KWA1 339 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 H7C1C5 153 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 CDC40O60508 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 TXNDC12O95881 172 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 TCRBP04435 133 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 SOX2P48431 317 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 RPS11P62280 158 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 LCN6P62502 163 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 DMWDQ09019 674 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 Q499Y3 187 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 CREB3L2Q70SY1 520 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 MARCH3Q86UD3 253 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 OR4D9Q8NGE8 314 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF721Q8TF20 911 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 S100A16Q96FQ6 103 aaKnown RBP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 INTS14Q96SY0 518 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ELF4Q99607 663 aaPredicted RBP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 SOX7Q9BT81 388 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 PRO3102Q9H379 93 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 WDR76Q9H967 626 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF222Q9UK12 451 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 THADAQ6YHU6 1953 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 IFITM5A6NNB3 132 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 AIPO00170 330 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 LAMTOR5O43504 91 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ZFPL1O95159 310 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 DDAH2O95865 285 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 H2AFB2P0C5Z0 115 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 GLB1P16278 677 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 GIFP27352 417 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 AGFG1P52594 562 aaKnown RBP8.73□□□□□ -1.01
COL6A3-204ENST00000392003 CARD18P57730 90 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF117Q03924 483 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 SSX9Q7RTT3 188 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 FAM122BQ7Z309 247 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 IZUMO1Q8IYV9 350 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 CMTM4Q8IZR5 234 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ZFP82Q8N141 532 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 C1orf216Q8TAB5 229 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 TAAR8Q969N4 342 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 MEGF10Q96KG7 1140 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 DERL3Q96Q80 235 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 RDH8Q9NYR8 311 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
COL6A3-204ENST00000392003 RPS10-NUDT3A0A1W2PQS6 291 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 ANXA2P2A6NMY6 339 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 NUDT21O43809 227 aaKnown RBP8.72□□□□□ -1.01
COL6A3-204ENST00000392003 IGKV3-11P04433 115 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 ANXA2P07355 339 aaKnown RBP8.72□□□□□ -1.01
COL6A3-204ENST00000392003 GP1BAP07359 652 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 SPCS3P61009 180 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 CBFBQ13951 182 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 EBPQ15125 230 aaKnown RBP8.72□□□□□ -1.01
COL6A3-204ENST00000392003 ANGPT1Q15389 498 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 VWA2Q5GFL6 755 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 ESPNLQ6ZVH7 1005 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 NUP54Q7Z3B4 507 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 LRRC75AQ8NAA5 344 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 OR1L3Q8NH93 324 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 C15orf40Q8WUR7 153 aa8.72□□□□□ -1.01
COL6A3-204ENST00000392003 THRSPQ92748 146 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms