RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 THBDP07204 575 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 B4GALT1P15291 398 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 NPR2P20594 1047 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 LAP3P28838 519 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 CDAP32320 146 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 KIR2DL3P43628 341 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 TAB1Q15750 504 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 DNM1P34Q6PK57 102 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 SKA3Q8IX90 412 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 SLC22A24Q8N4F4 322 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 NABP1Q96AH0 204 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 PLEKHA8Q96JA3 519 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 DACH2Q96NX9 599 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 HCAR1Q9BXC0 346 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 SIAEQ9HAT2 523 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 NDRG4Q9ULP0 352 aaKnown RBP13.54□□□□□ -0.24
PDGFB-202ENST00000381551 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 LOC100130705A0A1B0GUX0 176 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 FAM183AA6NL82 134 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 PRKYO43930 277 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 SCG5P05408 212 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 GGT2P36268 569 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 PTDSS1P48651 473 aaKnown RBP13.53□□□□□ -0.24
PDGFB-202ENST00000381551 SGCAQ16586 387 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 C1QTNF12Q5T7M4 302 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 FAM27BQ5VT28 67 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 PLBD1Q6P4A8 553 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 MEX3BQ6ZN04 569 aaKnown RBP13.53□□□□□ -0.24
PDGFB-202ENST00000381551 CPOQ8IVL8 374 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 GLB1L2Q8IW92 636 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 CCDC36Q8IYA8 594 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 OR9Q1Q8NGQ5 310 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 OR2T4Q8NH00 348 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 HTRA1Q92743 480 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 MUCL1Q96DR8 90 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 PRRG3Q9BZD7 231 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 RACGAP1Q9H0H5 632 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 MED20Q9H944 212 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 HINT3Q9NQE9 182 aaKnown RBP13.53□□□□□ -0.24
PDGFB-202ENST00000381551 CRIM1Q9NZV1 1036 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 PLEKHB1Q9UF11 243 aaPredicted RBP13.53□□□□□ -0.24
PDGFB-202ENST00000381551 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
PDGFB-202ENST00000381551 ARPC4-TTLL3A0A0A6YYG9 625 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 A0A1W2PPL8 197 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 A0A1W2PR80 420 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 SH3D21A4FU49 640 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 CYSRT1A8MQ03 144 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 FAM171A2A8MVW0 826 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 PRR23D1E9PI22 279 aaPredicted RBP13.52□□□□□ -0.25
PDGFB-202ENST00000381551 TLX2O43763 284 aaPredicted RBP13.52□□□□□ -0.25
PDGFB-202ENST00000381551 MPZL1O95297 269 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 GPANK1O95872 356 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 PRR23D2P0DMB1 279 aaPredicted RBP13.52□□□□□ -0.25
PDGFB-202ENST00000381551 CLUP10909 449 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 EPXP11678 715 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 SPI1P17947 270 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 PAICSP22234 425 aaKnown RBP13.52□□□□□ -0.25
PDGFB-202ENST00000381551 PYCR1P32322 319 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 GUCA1AP43080 201 aaPredicted RBP13.52□□□□□ -0.25
PDGFB-202ENST00000381551 KCNMB1Q16558 191 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 SSX8Q7RTT4 187 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 TCEANCQ8N8B7 351 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 OR51L1Q8NGJ5 315 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 TRUB1Q8WWH5 349 aaKnown RBP13.52□□□□□ -0.25
PDGFB-202ENST00000381551 UBE2FQ969M7 185 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 ZC3HAV1LQ96H79 300 aaKnown RBP13.52□□□□□ -0.25
PDGFB-202ENST00000381551 FOXN4Q96NZ1 517 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 PITX2Q99697 317 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 SH3GL3Q99963 347 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 OBP2BQ9NPH6 170 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 POLE4Q9NR33 117 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF224Q9NZL3 707 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 AMDHD2Q9Y303 409 aa13.52□□□□□ -0.25
PDGFB-202ENST00000381551 PRR14LQ5THK1 2151 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 H0YJX3 145 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 M0R129 80 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 FARS2O95363 451 aaKnown RBP13.51□□□□□ -0.25
PDGFB-202ENST00000381551 HLA-HP01893 362 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 TFP02787 698 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 GYPBP06028 91 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 GAAP10253 952 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 COL8A1P27658 744 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 CENPAP49450 140 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 CDC42P60953 191 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 UBE2NP61088 152 aaKnown RBP13.51□□□□□ -0.25
PDGFB-202ENST00000381551 HSF2Q03933 536 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 GLO1Q04760 184 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 PPA1Q15181 289 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 LINC01590Q5TEZ4 76 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 FBXW10Q5XX13 1052 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 UGT2A3Q6UWM9 527 aa13.51□□□□□ -0.25
PDGFB-202ENST00000381551 SEZ6L2Q6UXD5 910 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms