RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 CXXC5Q7LFL8 322 aaKnown RBP16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 NOXO1Q8NFA2 376 aa16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 SPATA3Q8NHX4 192 aa16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 LRGUKQ96M69 825 aa16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 TXNIPQ9H3M7 391 aa16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 NOX3Q9HBY0 568 aa16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 POFUT2Q9Y2G5 429 aa16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 COL6A5A8TX70 2615 aa16.33■□□□□ 0.2
TMEM88B-201ENST00000378821 VSTM5A8MXK1 200 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 TRMUO75648 421 aaKnown RBP16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 ACADSP16219 412 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 GIFP27352 417 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 EVX1P49640 407 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 CLRN1P58418 232 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 CTXN1P60606 82 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 GSG1Q2KHT4 349 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 CHRFAM7AQ494W8 412 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 ANKDD1AQ495B1 522 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 ZBED5Q49AG3 693 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 LRFN4Q6PJG9 635 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 VHLLQ6RSH7 139 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 HDDC2Q7Z4H3 204 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 HDAC2Q92769 488 aaKnown RBP16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 RSRC1Q96IZ7 334 aaKnown RBP16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 FOXN4Q96NZ1 517 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 GPA33Q99795 319 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 FOXB1Q99853 325 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 VRK1Q99986 396 aaPredicted RBP16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 CADM1Q9BY67 442 aaKnown RBP16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 MRPL13Q9BYD1 178 aaKnown RBP16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 TRIM15Q9C019 465 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 RAB1BQ9H0U4 201 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 CDC42EP3Q9UKI2 254 aa16.32■□□□□ 0.2
TMEM88B-201ENST00000378821 STAMBPO95630 424 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 B4GALT1P15291 398 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 RPL27P61353 136 aaKnown RBP16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 MYBPC1Q00872 1141 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 NPRL3Q12980 569 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 DAG1Q14118 895 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 HIST3H3Q16695 136 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 FAM98BQ52LJ0 330 aaKnown RBP16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 ZER1Q7Z7L7 766 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 ADGRG5Q8IZF4 528 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 SYT14Q8NB59 555 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 NEU4Q8WWR8 484 aaPredicted RBP16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 TSPAN32Q96QS1 320 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 PIMREGQ9BSJ6 248 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 KRCC1Q9NPI7 259 aaPredicted RBP16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 FBXL3Q9UKT7 428 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 ZNF346Q9UL40 294 aaKnown RBP16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 AURKCQ9UQB9 309 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 SIGLEC7Q9Y286 467 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 LYVE1Q9Y5Y7 322 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 CUBNO60494 3623 aa16.31■□□□□ 0.2
TMEM88B-201ENST00000378821 AQP12BA6NM10 295 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 CENPBD1B2RD01 187 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 GSC2O15499 205 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 QDPRP09417 244 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 FAM157CP0CG43 387 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 CAPZA2P47755 286 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 GZMKP49863 264 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 FXYD6P3P58550 94 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 TAF11Q15544 211 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 AQP12AQ8IXF9 295 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 ZNF540Q8NDQ6 660 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 ZNF519Q8TB69 540 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 POP5Q969H6 163 aaKnown RBP16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 MCHR2Q969V1 340 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 MS4A3Q96HJ5 214 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 VNN3Q9NY84 501 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 STX18Q9P2W9 335 aaKnown RBP16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 POMPQ9Y244 141 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 ADAM18Q9Y3Q7 739 aa16.3■□□□□ 0.2
TMEM88B-201ENST00000378821 MALRD1Q5VYJ5 2156 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 IGHV4-61A0A0C4DH41 118 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 UNC119BA6NIH7 251 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 DHHO43323 396 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 OR10H3O60404 316 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 PTP4A3O75365 173 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 UBL3O95164 117 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 IFNA2P01563 188 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 CD79AP11912 226 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 GLRXP35754 106 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 RPL4P36578 427 aaKnown RBP16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 RAB1AP62820 205 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 ERVK-25P63136 954 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 PIGFQ07326 219 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 SNTB2Q13425 540 aaKnown RBP16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 FLOT2Q14254 428 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 MSMPQ1L6U9 139 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 NRN1LQ496H8 165 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 THSD4Q6ZMP0 1018 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 SKA3Q8IX90 412 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 SVOPLQ8N434 492 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 CLDN22Q8N7P3 220 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 OR4C15Q8NGM1 316 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 MRPL24Q96A35 216 aaKnown RBP16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 NMD3Q96D46 503 aaKnown RBP16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 KCNK17Q96T54 332 aa16.29■□□□□ 0.2
TMEM88B-201ENST00000378821 SLC7A8Q9UHI5 535 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms