RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PRKXP51817 358 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 RIDAP52758 137 aaKnown RBP11.68□□□□□ -0.54
USP11-204ENST00000377107 POU3F1Q03052 451 aaPredicted RBP11.68□□□□□ -0.54
USP11-204ENST00000377107 SLC18B1Q6NT16 456 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 CASTOR1Q8WTX7 329 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 SEC22AQ96IW7 307 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 SLC46A1Q96NT5 459 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.68□□□□□ -0.54
USP11-204ENST00000377107 FOXQ1Q9C009 403 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 ZNF304Q9HCX3 659 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 MED11Q9P086 117 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 IL33O95760 270 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 WNT11O96014 354 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 RAB40ALP0C0E4 278 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 FOLR1P15328 257 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 RAB30Q15771 203 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 HACD4Q5VWC8 232 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 RAB40AQ8WXH6 277 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 B3GNT2Q9NY97 397 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 STEAP1Q9UHE8 339 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 CLDN16Q9Y5I7 305 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 TLCD2A6NGC4 264 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 NPIPA5E9PKD4 350 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 P2RY10O00398 339 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 LTBRP36941 435 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 SORDQ00796 357 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 MFGE8Q08431 387 aaPredicted RBP11.67□□□□□ -0.54
USP11-204ENST00000377107 PUDPQ08623 228 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 CCINQ13939 588 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 DAZLQ92904 295 aaKnown RBP11.67□□□□□ -0.54
USP11-204ENST00000377107 NARS2Q96I59 477 aaKnown RBP11.67□□□□□ -0.54
USP11-204ENST00000377107 NPAS1Q99742 590 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 C7orf50Q9BRJ6 194 aaKnown RBP11.67□□□□□ -0.54
USP11-204ENST00000377107 NMNAT2Q9BZQ4 307 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 NPIPA1Q9UND3 350 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 CCSO14618 274 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 LMX1BO60663 402 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 GGTLC2Q14390 218 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 FAM122BQ7Z309 247 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 OR4S1Q8NGB4 309 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 OR1L3Q8NH93 324 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 FBXO4Q9UKT5 387 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 PLEKHA6Q9Y2H5 1048 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 PCNX3Q9H6A9 2034 aa11.67□□□□□ -0.54
USP11-204ENST00000377107 A0A1W2PPL8 197 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 TMEM235A6NFC5 223 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 TMEM212A6NML5 194 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 LGALS8O00214 317 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 VAMP1P23763 118 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 ABCD3P28288 659 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 KIR3DL2P43630 455 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 COL28A1Q2UY09 1125 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 EXOSC6Q5RKV6 272 aaKnown RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 C3P1Q6ZMU1 363 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 KCTD20Q7Z5Y7 419 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 OR10H5Q8NGA6 315 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 HAVCR2Q8TDQ0 301 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 CMBLQ96DG6 245 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 ARL5BQ96KC2 179 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 KLRF1Q9NZS2 232 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 ASAH2BP0C7U1 165 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 IFNGR1P15260 489 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 NFYAP23511 347 aaPredicted RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP11-204ENST00000377107 C2orf68Q2NKX9 166 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 KCTD18Q6PI47 426 aaPredicted RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 DCXRQ7Z4W1 244 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 CDC20BQ86Y33 519 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 LIX1LQ8IVB5 337 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 C9orf40Q8IXQ3 194 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 FAM131CQ96AQ9 280 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 C4orf45Q96LM5 186 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 ABHD6Q9BV23 337 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 FGF21Q9NSA1 209 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 TAS2R5Q9NYW4 299 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 RNF215Q9Y6U7 377 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 AHCTF1Q8WYP5 2266 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 TRAV36DV7A0A075B6V5 113 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 TMEM269A0A1B0GVZ9 245 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 PRSS37A4D1T9 235 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 GGT3PA6NGU5 568 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 GLSO94925 669 aaPredicted RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 RAB3DO95716 219 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 RPS4XP62701 263 aaKnown RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 TAF13Q15543 124 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 UNQ9370/PRO34162Q6UXP9 181 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 NUP54Q7Z3B4 507 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 OTOSQ8NHW6 89 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 GPR137Q96N19 417 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 RBP7Q96R05 134 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 MNTQ99583 582 aa11.66□□□□□ -0.54
USP11-204ENST00000377107 NOP16Q9Y3C1 178 aaKnown RBP11.66□□□□□ -0.54
USP11-204ENST00000377107 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
USP11-204ENST00000377107 ANKRD20A5PA0PJZ0 165 aa11.65□□□□□ -0.54
USP11-204ENST00000377107 ATF4P18848 351 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms