RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ITGA2P17301 1181 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 GATA3P23771 443 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 COL8A2P25067 703 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 CRYBB2P43320 205 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 UGT2B15P54855 530 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 PCBD1P61457 104 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 SELPLGQ14242 412 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 ANKDD1AQ495B1 522 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 TTMPQ5BVD1 217 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 C12orf54Q6X4T0 127 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 LRP11Q86VZ4 500 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 TREML1Q86YW5 311 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 LRRC17Q8N6Y2 441 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 PCYOX1LQ8NBM8 494 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 RAB1CQ92928 201 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 ELMOD3Q96FG2 381 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 LRRC37BQ96QE4 947 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 RBP7Q96R05 134 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 ZNF347Q96SE7 839 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 DIRC2Q96SL1 478 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 WACQ9BTA9 647 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 EGLN1Q9GZT9 426 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 VIPAS39Q9H9C1 493 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 SAP30LQ9HAJ7 183 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 GID8Q9NWU2 228 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 MYEF2Q9P2K5 600 aaKnown RBP12.62□□□□□ -0.39
HDAC6-204ENST00000376643 A0A0G2JMP0 313 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 A0A0X1KG70 313 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 J3QLI3 93 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 TRMUO75648 421 aaKnown RBP12.61□□□□□ -0.39
HDAC6-204ENST00000376643 RP2O75695 350 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 THY1P04216 161 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 F13BP05160 661 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 STOMP27105 288 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
HDAC6-204ENST00000376643 CCL8P80075 99 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 CD47Q08722 323 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 ST3GAL3Q11203 375 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 NANOGP8Q6NSW7 305 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 ZER1Q7Z7L7 766 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 PEG10Q86TG7 708 aaKnown RBP12.61□□□□□ -0.39
HDAC6-204ENST00000376643 RBM45Q8IUH3 476 aaKnown RBP12.61□□□□□ -0.39
HDAC6-204ENST00000376643 ICA1LQ8NDH6 482 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 OR4M2Q8NGB6 313 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 OR4D11Q8NGI4 311 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 OR1J1Q8NGS3 322 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 YIPF5Q969M3 257 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 LRRC58Q96CX6 371 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 PRSS27Q9BQR3 290 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 TXNIPQ9H3M7 391 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 NARFLQ9H6Q4 476 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 MEPEQ9NQ76 525 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-204ENST00000376643 TREM2Q9NZC2 230 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 RIMS3Q9UJD0 308 aa12.61□□□□□ -0.39
HDAC6-204ENST00000376643 A6NIZ1 184 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 NCR1O76036 304 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 MMP7P09237 267 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-204ENST00000376643 TUBG1P23258 451 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 AQP2P41181 271 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 MAGEB1P43366 347 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 LIMS1P48059 325 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ZNF81P51508 661 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ARHGDIAP52565 204 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 RAP1BP61224 184 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 RAP1AP62834 184 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ALG10Q5BKT4 473 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 PABPC1L2AQ5JQF8 200 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 THEM4Q5T1C6 240 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ARMC4Q5T2S8 1044 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 USP43Q70EL4 1123 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 WDFY1Q8IWB7 410 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 LRRC18Q8N456 261 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 SYT14Q8NB59 555 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 FGFBP3Q8TAT2 258 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ZMYND19Q96E35 227 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-204ENST00000376643 OR51B6Q9H340 312 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ZNF665Q9H7R5 613 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ELOVL3Q9HB03 270 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 TUBG2Q9NRH3 451 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 ZDHHC8Q9ULC8 765 aa12.6□□□□□ -0.39
HDAC6-204ENST00000376643 FAM157AC9JC47 383 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 TRIM77I1YAP6 450 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 MRASO14807 208 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 CLPTM1O96005 669 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 CCL2P13500 99 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 CCNOP22674 350 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 GZMMP51124 257 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 LMO4P61968 165 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 ALKBH6Q3KRA9 238 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 FAM27BQ5VT28 67 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 FAHD2BQ6P2I3 314 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-204ENST00000376643 USP51Q70EK9 711 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 ARPINQ7Z6K5 226 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 CALHM3Q86XJ0 350 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 PFN4Q8NHR9 129 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 TMEM255BQ8WV15 326 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 THOC1Q96FV9 657 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms