RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 OR2F1Q13607 317 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 TOR2AQ5JU69 321 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 MARCH3Q86UD3 253 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 GABRG1Q8N1C3 465 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 SIRT6Q8N6T7 355 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 OR2AK2Q8NG84 335 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 FAM213BQ8TBF2 198 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 APH1BQ8WW43 257 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 FRZBQ92765 325 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 SSX3Q99909 188 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 KLK11Q9UBX7 282 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 EXO1Q9UQ84 846 aaKnown RBP10.56□□□□□ -0.72
PTCH1-203ENST00000375274 PTRH2Q9Y3E5 179 aaKnown RBP10.56□□□□□ -0.72
PTCH1-203ENST00000375274 OR5K3A6NET4 321 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 SCO1O75880 301 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 AKR1C1Q04828 323 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 ABHD17BQ5VST6 288 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 GLIPR1L1Q6UWM5 242 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 LRRC18Q8N456 261 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 OR13H1Q8NG92 308 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 GCDHQ92947 438 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-203ENST00000375274 ZNF775Q96BV0 537 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-203ENST00000375274 ORAI1Q96D31 301 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 RNF170Q96K19 258 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 FGF21Q9NSA1 209 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 FBXO7Q9Y3I1 522 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 WIF1Q9Y5W5 379 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 PTPRZ1P23471 2315 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-203ENST00000375274 H0Y8X5 98 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 GABREP78334 506 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 HSD17B11Q8NBQ5 300 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 MALSU1Q96EH3 234 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 DHRS9Q9BPW9 319 aa10.56□□□□□ -0.72
PTCH1-203ENST00000375274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 MSTNO14793 375 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 SLC2A1P11166 492 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 MMP15P51511 669 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 ADPRHP54922 357 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 CLDN17P56750 224 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 UBE2KP61086 200 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 CDK5Q00535 292 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TEX261Q6UWH6 196 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 STAC2Q6ZMT1 411 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 C17orf107Q6ZR85 190 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 MOB3CQ70IA8 216 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 GRINAQ7Z429 371 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 ARIH2OSQ8N7S6 290 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 PATE1Q8WXA2 126 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 RSC1A1Q92681 617 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 KCNE3Q9Y6H6 103 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 U3KQ87 197 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 PCM1Q15154 2024 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 A0A087WV62 115 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 LOC107986453A0A1B0GWG9 222 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 OR5H14A6NHG9 310 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 SSX4O60224 188 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 ACHEP22303 614 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 HMGN3Q15651 99 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 OR4Q3Q8NH05 313 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 CDCP1Q9H5V8 836 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 CDH20Q9HBT6 801 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TAS2R5Q9NYW4 299 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TAS2R4Q9NYW5 299 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 CD207Q9UJ71 328 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TRBV5-3A0A0A0MS03 114 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TLCD2A6NGC4 264 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 EIF4E2O60573 245 aaKnown RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 CD3DP04234 171 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TPOP07202 933 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 MAP2K6P52564 334 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 DOC2BQ14184 412 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 GLYR1Q49A26 553 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 PRAMEF20Q5VT98 475 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 NPSR1Q6W5P4 371 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 NANOS1Q8WY41 292 aaKnown RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 OBP2AQ9NY56 170 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 PPIL1Q9Y3C6 166 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TPRP12270 2363 aaKnown RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TRAV1-2A0A0B4J238 106 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 BET1O15155 118 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 HTR5AP47898 357 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 RFX2P48378 723 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 PCBD1P61457 104 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 TIAL1Q01085 375 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 ACKR1Q16570 336 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 CDKN3Q16667 212 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 WDR88Q6ZMY6 472 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 ACOT7LQ6ZUV0 252 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 H1FNTQ75WM6 255 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 NLRC3Q7RTR2 1065 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 PPP1R3BQ86XI6 285 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 RELL2Q8NC24 303 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-203ENST00000375274 HAS2Q92819 552 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 SMCO4Q9NRQ5 59 aa10.55□□□□□ -0.72
PTCH1-203ENST00000375274 ANKRD30BLA7E2S9 258 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 OIP5O43482 229 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ADRB1P08588 477 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 CCR2P41597 374 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 YBX1P67809 324 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms