RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 OR14A2Q96R54 314 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 TAAR9Q96RI9 348 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 USB1Q9BQ65 265 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 PIGQQ9BRB3 760 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 MRPL13Q9BYD1 178 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 NRSN2Q9GZP1 204 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 HDHD2Q9H0R4 259 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 C11orf54Q9H0W9 315 aaPredicted RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 SCPEP1Q9HB40 452 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 NEK6Q9HC98 313 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC39A1Q9NY26 324 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 STEAP1Q9UHE8 339 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 HHLA2Q9UM44 414 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 COPS3Q9UNS2 423 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 PCDHGA9Q9Y5G4 932 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 CACNG2Q9Y698 323 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 R4GMQ9 66 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 SHISA3A0PJX4 238 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF726A6NNF4 738 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 XRCC3O43542 346 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 KLF7O75840 302 aaPredicted RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 OR2J2O76002 312 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 ALX3O95076 343 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 HPP00738 406 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 YES1P07947 543 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 FAM157BP0CG42 384 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 C4BPBP20851 252 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 CTSSP25774 331 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 LAP3P28838 519 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 EFNA3P52797 238 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 TPTEP56180 551 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 FBXW4P57775 412 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 RPS15P62841 145 aaKnown RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 RAC1P63000 192 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 CBX3Q13185 183 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 SNTB2Q13425 540 aaKnown RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 ARL6IP1Q15041 203 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 HIST3H3Q16695 136 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 MEP1BQ16820 701 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 BTBD16Q32M84 506 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 FAM69BQ5VUD6 431 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 B3GLCTQ6Y288 498 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 TMPPEQ6ZT21 453 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 TMPRSS9Q7Z410 1059 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 RPS19BP1Q86WX3 136 aaKnown RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 CATSPERDQ86XM0 798 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 PRSS58Q8IYP2 241 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 MAML2Q8IZL2 1156 aaPredicted RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 SHISA5Q8N114 240 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 TMEM156Q8N614 296 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF511Q8NB15 262 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC26A10Q8NG04 563 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 OR4M1Q8NGD0 313 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 OR6M1Q8NGM8 313 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 OR6F1Q8NGZ6 308 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 RNF133Q8WVZ7 376 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 MR1Q95460 341 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 TRIM63Q969Q1 353 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 TMEM106AQ96A25 262 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 C5orf34Q96MH7 638 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 OR2M2Q96R28 347 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 DCLRE1CQ96SD1 692 aaKnown RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 UQCC2Q9BRT2 126 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 ULBP3Q9BZM4 244 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 C1orf198Q9H425 327 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 SH2D2AQ9NP31 389 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 MCUBQ9NWR8 336 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 PAQR5Q9NXK6 330 aaPredicted RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 ABI3Q9P2A4 366 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 GHRLQ9UBU3 117 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 FBLN5Q9UBX5 448 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF391Q9UJN7 358 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 DHDHQ9UQ10 334 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 RBMX2Q9Y388 322 aaKnown RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 CHCHD2Q9Y6H1 151 aaPredicted RBP7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 LAMA3Q16787 3333 aa7.82□□□□□ -1.16
SNRNP40-202ENST00000373720 A0A0G2JMP0 313 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 A0A0X1KG70 313 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 A0A1B0GVI7 797 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 C7orf66A4D0T2 115 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 METTL21EPA6NDL7 271 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OR6C65A6NJZ3 312 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 AQP7P3A6NL99 342 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 INMT-MINDY4F8WBC2 141 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC17A2O00624 439 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 RGS13O14921 159 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 AKR7A3O95154 331 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 SERPINA7P05543 415 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 MELTFP08582 738 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 CSF1P09603 554 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OR8G3PP0DMU2 310 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 TFPIP10646 304 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 PSKH1P11801 424 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 COX6A1P12074 109 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF43P17038 809 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ATF1P18846 271 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 RAB6AP20340 208 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 DPP4P27487 766 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 CD82P27701 267 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 PTGDSP41222 190 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms