RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PPP1CAP62136 330 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 PPIAP62937 165 aaKnown RBP13.41□□□□□ -0.26
COL9A2-202ENST00000372748 HAGHLQ6PII5 290 aaPredicted RBP13.41□□□□□ -0.26
COL9A2-202ENST00000372748 LDLRAD3Q86YD5 345 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 OR5T2Q8NGG2 359 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 OR4C3Q8NH37 302 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF417Q8TAU3 575 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 GPR148Q8TDV2 347 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 RERGQ96A58 199 aaPredicted RBP13.41□□□□□ -0.26
COL9A2-202ENST00000372748 COMMD4Q9H0A8 199 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 LRIT1Q9P2V4 623 aa13.41□□□□□ -0.26
COL9A2-202ENST00000372748 KLF2Q9Y5W3 355 aaPredicted RBP13.41□□□□□ -0.26
COL9A2-202ENST00000372748 A0A1W2PQF6 199 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 URADA6NGE7 173 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 KLF8O95600 359 aaPredicted RBP13.4□□□□□ -0.26
COL9A2-202ENST00000372748 GPR143P51810 404 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 PSMD4P55036 377 aaKnown RBP13.4□□□□□ -0.26
COL9A2-202ENST00000372748 CTXN1P60606 82 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 DHRS2Q13268 280 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 KIR2DS3Q14952 304 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 NKPD1Q17RQ9 610 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF542PQ5EBM4 170 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 MANEAQ5SRI9 462 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 GLT8D1Q68CQ7 371 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 KCNRGQ8N5I3 272 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 CAMKVQ8NCB2 501 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 WDR92Q96MX6 357 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 ZFYVE21Q9BQ24 234 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 GPN3Q9UHW5 284 aaPredicted RBP13.4□□□□□ -0.26
COL9A2-202ENST00000372748 FANCMQ8IYD8 2048 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 MYO15AQ9UKN7 3530 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 CSTAP01040 98 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF28P17035 718 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 ADCYAP1P18509 176 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 MAOBP27338 520 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 AGTR1P30556 359 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 DLSTP36957 453 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 CBX5P45973 191 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 CAPZA1P52907 286 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 ATP1B3P54709 279 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 SNTB1Q13884 538 aaKnown RBP13.4□□□□□ -0.26
COL9A2-202ENST00000372748 NFATC4Q14934 902 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 DEFB110Q30KQ9 67 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 ATPAF1Q5TC12 328 aaPredicted RBP13.4□□□□□ -0.26
COL9A2-202ENST00000372748 SLC43A2Q8N370 569 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 CCDC107Q8WV48 283 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 PPP1R1CQ8WVI7 109 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 SPACA7Q96KW9 195 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 ESRP2Q9H6T0 727 aaKnown RBP13.4□□□□□ -0.26
COL9A2-202ENST00000372748 TNFSF18Q9UNG2 199 aa13.4□□□□□ -0.26
COL9A2-202ENST00000372748 RNF222A6NCQ9 220 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 HLA-AP01891 365 aaKnown RBP13.39□□□□□ -0.27
COL9A2-202ENST00000372748 CD34P28906 385 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 PBX2P40425 430 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 HFEQ30201 348 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 C11orf87Q6NUJ2 197 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 ZCCHC12Q6PEW1 402 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 SLC35D2Q76EJ3 337 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 RCBTB1Q8NDN9 531 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 LILRB1Q8NHL6 650 aaPredicted RBP13.39□□□□□ -0.27
COL9A2-202ENST00000372748 RELTQ969Z4 430 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 COMMD9Q9P000 198 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 TRBV5-7A0A0A0MS05 114 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 F5H0A9 414 aaPredicted RBP13.39□□□□□ -0.27
COL9A2-202ENST00000372748 LINC01387J3KSC0 135 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 BCL2L11O43521 198 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM127O75204 238 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 CCR4P51679 360 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 PAN3Q58A45 887 aaKnown RBP13.39□□□□□ -0.27
COL9A2-202ENST00000372748 WDR38Q5JTN6 314 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF595Q8IYB9 648 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 OR4S1Q8NGB4 309 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 OR5M8Q8NGP6 311 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 CTHRC1Q96CG8 243 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 SEH1LQ96EE3 360 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 C1orf198Q9H425 327 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 SLC22A13Q9Y226 551 aa13.39□□□□□ -0.27
COL9A2-202ENST00000372748 IGKV1D-42A0A075B6H8 117 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 DOK2O60496 412 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 CDC40O60508 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 SRPX2O60687 465 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 NAT2P11245 290 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF10P21506 573 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 GRK6P43250 576 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 RPS4XP62701 263 aaKnown RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 SRSF3P84103 164 aaKnown RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 RAB11BQ15907 218 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 OR10K2Q6IF99 312 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF550Q7Z398 422 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 CD163Q86VB7 1156 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 CDC20BQ86Y33 519 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 GPX8Q8TED1 209 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 C2CD4CQ8TF44 421 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 C3orf49Q96BT1 292 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 POTEKPQ9BYX7 375 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms