RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 A0A1W2PPC1 479 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1W2PR64 198 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1W2PRV1 198 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM82A0PJX8 343 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 GGT3PA6NGU5 568 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ELOA3DA6NLF2 546 aaPredicted RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 RFPL4AA6NLU0 287 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 HMSDA8MTL9 139 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 RFPL4AL1F8VTS6 287 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 CTDSPLO15194 276 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ADAP1O75689 374 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 RCBTB2O95199 551 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 BPNT1O95861 308 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 LRG1P02750 347 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 RNF224P0DH78 156 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ADRB3P13945 408 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 GALP22466 123 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 PTAFRP25105 342 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 CALCRP30988 508 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 CCKBRP32239 447 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ARFIP1P53367 373 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 F2RL1P55085 397 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 OR2B8PP59922 312 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 SKP1P63208 163 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 TNP2Q05952 138 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 PPP1R1AQ13522 171 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 SNTB1Q13884 538 aaKnown RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 RAB33AQ14088 237 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 HABP2Q14520 560 aaPredicted RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF234Q14588 700 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 PON3Q15166 354 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 C2orf76Q3KRA6 126 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ELOA3BQ3SY89 546 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ARSJQ5FYB0 599 aaPredicted RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM31Q5JXX7 168 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 NCMAPQ5T1S8 102 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 FAM109BQ6ICB4 259 aaPredicted RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 STEAP1BQ6NZ63 245 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 DPY19L4Q7Z388 723 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 VN1R4Q7Z5H5 301 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 MARCH3Q86UD3 253 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 RANBP3LQ86VV4 465 aaPredicted RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 CDK20Q8IZL9 346 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 GABRG1Q8N1C3 465 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 PRSS35Q8N3Z0 413 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF676Q8N7Q3 588 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 COX18Q8N8Q8 333 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ELOA3Q8NG57 546 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 OR2I1PQ8NGU4 316 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 OR6N2Q8NGY6 317 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 OR5AK2Q8NH90 309 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 GLYATL2Q8WU03 294 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 SLC25A43Q8WUT9 341 aaPredicted RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 MRGPRFQ96AM1 343 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 MIB2Q96AX9 1013 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 MOAP1Q96BY2 351 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 RHOVQ96L33 236 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM68Q96MH6 324 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 SPACA5Q96QH8 159 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 MAP3K3Q99759 626 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 FAM83CQ9BQN1 747 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 TMPRSS13Q9BYE2 586 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 CST11Q9H112 138 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 CACYBPQ9HB71 228 aaKnown RBP4.9□□□□□ -1.62
ATG4A-204ENST00000372246 MED9Q9NWA0 146 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 MIOXQ9UGB7 285 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 CHRNA9Q9UGM1 479 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 GLS2Q9UI32 602 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 VSIG4Q9Y279 399 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF281Q9Y2X9 895 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 ASPMQ8IZT6 3477 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 HEATR5AQ86XA9 2040 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 MPDZO75970 2070 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 A0A087WV62 115 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 KANTRA0A1W2PQU2 76 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 WIPF3A6NGB9 483 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 SNRPGP15A8MWD9 76 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 H7C417 338 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 CTSVO60911 334 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 UPK3AO75631 287 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 MPZL1O95297 269 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 RAB3DO95716 219 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 WDPCPO95876 746 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 EFEMP2O95967 443 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 PNPP00491 289 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 RPA2P15927 270 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 MUC1P15941 1255 aaPredicted RBP4.9□□□□□ -1.63
ATG4A-204ENST00000372246 NQO2P16083 231 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 RFC3P40938 356 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 CASRP41180 1078 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 CCR4P51679 360 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 TAS2R43P59537 309 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 AP3S2P59780 193 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 PPP1CAP62136 330 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 SLC7A9P82251 487 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 CDK3Q00526 305 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 DUSP8Q13202 625 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 SGCAQ16586 387 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 DEFB110Q30KQ9 67 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 GFOD2Q3B7J2 385 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms