RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 C12orf73Q69YU5 71 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 TMPPEQ6ZT21 453 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 RFLNBQ8N5W9 214 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 SLC25A43Q8WUT9 341 aaPredicted RBP13.17□□□□□ -0.3
RPF1-202ENST00000370656 TRUB1Q8WWH5 349 aaKnown RBP13.17□□□□□ -0.3
RPF1-202ENST00000370656 TMEM234Q8WY98 164 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 ST8SIA1Q92185 356 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 MSI2Q96DH6 328 aaKnown RBP13.17□□□□□ -0.3
RPF1-202ENST00000370656 SLC25A19Q9HC21 320 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
RPF1-202ENST00000370656 RPS6KB2Q9UBS0 482 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 MYRFQ9Y2G1 1151 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 MED31Q9Y3C7 131 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 A0A1W2PR80 420 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 VWC2LB2RUY7 222 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 TCF21O43680 179 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 MRPL33O75394 65 aaKnown RBP13.16□□□□□ -0.3
RPF1-202ENST00000370656 TGFAP01135 160 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 GIPRP48546 466 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 IDH2P48735 452 aaKnown RBP13.16□□□□□ -0.3
RPF1-202ENST00000370656 MAD2L1BPQ15013 274 aaPredicted RBP13.16□□□□□ -0.3
RPF1-202ENST00000370656 GABRA6Q16445 453 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 RBM48Q5RL73 367 aaKnown RBP13.16□□□□□ -0.3
RPF1-202ENST00000370656 SLC25A30Q5SVS4 291 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 C1QTNF12Q5T7M4 302 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 ZNF540Q8NDQ6 660 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 C1QTNF6Q9BXI9 259 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 MALT1Q9UDY8 824 aa13.16□□□□□ -0.3
RPF1-202ENST00000370656 SPIN1Q9Y657 262 aaPredicted RBP13.16□□□□□ -0.3
RPF1-202ENST00000370656 IGKV1D-42A0A075B6H8 117 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 LOC390937A0A1W2PQ73 354 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 LY6HO94772 140 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 TFPIP10646 304 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 MAKP20794 623 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 SNRPGP62308 76 aaKnown RBP13.15□□□□□ -0.3
RPF1-202ENST00000370656 SNRPD2P62316 118 aaKnown RBP13.15□□□□□ -0.3
RPF1-202ENST00000370656 CSNK2BP67870 215 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 IL1RL1Q01638 556 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 TGFBR3Q03167 851 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 TOP3AQ13472 1001 aaPredicted RBP13.15□□□□□ -0.3
RPF1-202ENST00000370656 FHL1Q13642 323 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 CARTPTQ16568 116 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 SYT14P1Q58G82 188 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 ABLIM2Q6H8Q1 611 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 TTC33Q6PID6 262 aaPredicted RBP13.15□□□□□ -0.3
RPF1-202ENST00000370656 CADM2Q8N3J6 435 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 C17orf78Q8N4C9 275 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 BPIFA2Q96DR5 249 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 FBXO17Q96EF6 278 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 FAM46AQ96IP4 442 aaKnown RBP13.15□□□□□ -0.3
RPF1-202ENST00000370656 BATF3Q9NR55 127 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 C20orf141Q9NUB4 165 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 PLCXD1Q9NUJ7 323 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 SELENONQ9NZV5 590 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 UPB1Q9UBR1 384 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 AMDHD2Q9Y303 409 aa13.15□□□□□ -0.3
RPF1-202ENST00000370656 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 DNPH1O43598 174 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 PIP5K1CO60331 668 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 MPZL2O60487 215 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 NPIPB7O75200 414 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 WBP4O75554 376 aaKnown RBP13.14□□□□□ -0.31
RPF1-202ENST00000370656 TSPAN19P0C672 248 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 SMIM18P0DKX4 95 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 FKBP2P26885 142 aaKnown RBP13.14□□□□□ -0.31
RPF1-202ENST00000370656 HTR3AP46098 478 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 SLC9A3P48764 834 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 MAP2K6P52564 334 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 TUBA4AP68366 448 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 APOFQ13790 326 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 RPL13AP3Q6NVV1 102 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 KLHL24Q6TFL4 600 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 ZNF620Q6ZNG0 422 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 ENTHD1Q8IYW4 607 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 CDK20Q8IZL9 346 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 C1orf162Q8NEQ5 155 aaPredicted RBP13.14□□□□□ -0.31
RPF1-202ENST00000370656 PARPBPQ9NWS1 579 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 SCOCQ9UIL1 159 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 OSGIN1Q9UJX0 560 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 CDH10Q9Y6N8 788 aa13.14□□□□□ -0.31
RPF1-202ENST00000370656 UNC119BA6NIH7 251 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 ZNF716A6NP11 495 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 FZD7O75084 574 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 PMS2P2O95744 297 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 WNT11O96014 354 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 IGFBP1P08833 259 aaPredicted RBP13.13□□□□□ -0.31
RPF1-202ENST00000370656 IFI30P13284 250 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 CRHBPP24387 322 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 SRP14P37108 136 aaKnown RBP13.13□□□□□ -0.31
RPF1-202ENST00000370656 APOBEC1P41238 236 aaKnown RBP13.13□□□□□ -0.31
RPF1-202ENST00000370656 FXYD6P3P58550 94 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 CDC42P60953 191 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 EGR4Q05215 589 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 SWI5Q1ZZU3 235 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 CR1LQ2VPA4 569 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 ANKDD1AQ495B1 522 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 C12orf54Q6X4T0 127 aa13.13□□□□□ -0.31
RPF1-202ENST00000370656 SLC46A3Q7Z3Q1 461 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms