RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SLC2A5P22732 501 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ETV6P41212 452 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 TAS2R19P59542 299 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 HERV-K104P61576 105 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 RRAS2P62070 204 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 IRF3Q14653 427 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 BCL2A1Q16548 175 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CT45A2Q5DJT8 189 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PMS2CLQ68D20 193 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MAML2Q8IZL2 1156 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 TMEM178AQ8NBL3 297 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 TMEM52Q8NDY8 209 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 STEAP2Q8NFT2 490 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 OR56B4Q8NH76 319 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 BORCS8Q96FH0 119 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2M2Q96R28 347 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SLCO5A1Q9H2Y9 848 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SYNPO2LQ9H987 977 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 GALNT9Q9HCQ5 603 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MRPS18AQ9NVS2 196 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 COLQQ9Y215 455 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 HIF3AQ9Y2N7 669 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 KCNIP3Q9Y2W7 256 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ANAPC1Q9H1A4 1944 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 DSPPQ9NZW4 1301 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ARID1BQ8NFD5 2236 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CCDC187A0A096LP49 1063 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 TEX13DA0A0J9YY54 714 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 TRIM64A6NGJ6 449 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 NUPL2O15504 423 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CBR3O75828 277 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MPIG6BO95866 241 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PDGFAP04085 211 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 WNT1P04628 370 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 NPR2P20594 1047 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SSTR2P30874 369 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 TGM4P49221 684 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 POU3F4P49335 361 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 EVX1P49640 407 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF136P52737 540 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 P2RX3P56373 397 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SELENOVP59797 346 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SPOCK1Q08629 439 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 FGL1Q08830 312 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ECH1Q13011 328 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 NKAPLQ5M9Q1 402 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 EIF5AL1Q6IS14 154 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CREB3L2Q70SY1 520 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SERPINA12Q8IW75 414 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC22A24Q8N4F4 322 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PTPMT1Q8WUK0 201 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ARSGQ96EG1 525 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 KTI12Q96EK9 354 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PRRT1Q99946 306 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 OR10A4Q9H209 315 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 OR51J1Q9H342 316 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 METTL8Q9H825 291 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MAN2C1Q9NTJ4 1040 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 GLTPQ9NZD2 209 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MYOTQ9UBF9 498 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MGAT4CQ9UBM8 478 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 B9D1Q9UPM9 204 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 A0A1B0GVC2 190 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 A6NIN4 97 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 LINC01387J3KSC0 135 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 BHLHE40O14503 412 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 FABP7O15540 132 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PLPP2O43688 288 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CRTAPO75718 401 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 APOC3P02656 99 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ITGB2P05107 769 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 LAP3P28838 519 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 AGTR1P30556 359 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 RBMXP38159 391 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CRYBB2P43320 205 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 FOXF1Q12946 379 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 GPR176Q14439 515 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SSX1Q16384 188 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SIGIRRQ6IA17 410 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PWWP2BQ6NUJ5 590 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC16A14Q7RTX9 510 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MRPL21Q7Z2W9 205 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 IQCF2Q8IXL9 164 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF565Q8N9K5 539 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CCDC54Q8NEL0 328 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ZFAND1Q8TCF1 268 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 INTS12Q96CB8 462 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 THOC3Q96J01 351 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 WDFY2Q96P53 400 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ISG20L2Q9H9L3 353 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 LIN7BQ9HAP6 207 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF701Q9NV72 531 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 FKBP14Q9NWM8 211 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PTTG3PQ9NZH4 202 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 FLRT3Q9NZU0 649 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MRPL15Q9P015 296 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MN1Q10571 1320 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 MTCL1Q9Y4B5 1905 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CKAP5Q14008 2032 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 LOC100289279A0A1B0GTE1 492 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms