RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TRMT10AQ8TBZ6 339 aaKnown RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 SNX33Q8WV41 574 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 GHSRQ92847 366 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 WNT2BQ93097 391 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 RFT1Q96AA3 541 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 C3orf49Q96BT1 292 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ELMOD3Q96FG2 381 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 MOGAT1Q96PD6 335 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 OR11A1Q9GZK7 315 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 CMC2Q9NRP2 79 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 MRPL15Q9P015 296 aaKnown RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 SIGLEC7Q9Y286 467 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 TMEM5Q9Y2B1 443 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 SESN1Q9Y6P5 492 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 GALR2O43603 387 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 IFNGP01579 166 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 F13BP05160 661 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 NMBP08949 121 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 CD3GP09693 182 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 RD3LP0DJH9 198 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ACP1P24666 158 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 GRPRP30550 384 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 SCRN3Q0VDG4 424 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 SKP2Q13309 424 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 PLA1AQ53H76 456 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 HBMQ6B0K9 141 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 METAP1DQ6UB28 335 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 FAM198BQ6UWH4 519 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 KDM8Q8N371 416 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 OR5J2Q8NH18 312 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ZNF671Q8TAW3 534 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 KLRF1Q9NZS2 232 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 TMEM200CA6NKL6 621 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ANXA2P2A6NMY6 339 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 C9J4A7 227 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 H7C1C5 153 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 TO15178 435 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 PLGP00747 810 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 BTCP35070 178 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 MTNR1BP49286 362 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 SLC26A5P58743 744 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ZP1P60852 638 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 LCN6P62502 163 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 IL11RAQ14626 422 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.62□□□□□ -0.87
TPM3-212ENST00000368533 SLC25A35Q3KQZ1 300 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 DCAF12Q5T6F0 453 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 HES3Q5TGS1 186 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 RGS7BPQ6MZT1 257 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 MRPL14Q6P1L8 145 aaKnown RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 SFXN4Q6P4A7 337 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 C3P1Q6ZMU1 363 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 NFAM1Q8NET5 270 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 NARS2Q96I59 477 aaKnown RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 JSRP1Q96MG2 331 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 FOXN4Q96NZ1 517 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ADAT1Q9BUB4 502 aaKnown RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 DEFB126Q9BYW3 111 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 CCDC86Q9H6F5 360 aaKnown RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 EMC7Q9NPA0 242 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 NANSQ9NR45 359 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 GNG8Q9UK08 70 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 FLVCR2Q9UPI3 526 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 IER3IP1Q9Y5U9 82 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 C11orf98E9PRG8 122 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 G3V3Q6 166 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 KLF7O75840 302 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 HLA-DQB1P01920 261 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 SLC6A6P31641 620 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 PITPNBP48739 271 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 NRG3P56975 720 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 MC2RQ01718 297 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ISXQ2M1V0 245 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 NHLRC3Q5JS37 347 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ULK3Q6PHR2 472 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 LYPD4Q6UWN0 246 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ZNF550Q7Z398 422 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 ACOT12Q8WYK0 555 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 YIPF5Q969M3 257 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 KTI12Q96EK9 354 aaPredicted RBP9.62□□□□□ -0.87
TPM3-212ENST00000368533 LRRC46Q96FV0 321 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 TRIM2Q9C040 744 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 COA4Q9NYJ1 87 aa9.62□□□□□ -0.87
TPM3-212ENST00000368533 NUP210LQ5VU65 1888 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 IGLV3-12A0A075B6K2 115 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 MCIDASD6RGH6 385 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 TSPAN2O60636 221 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 CBR1P16152 277 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 CXCL2P19875 107 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 LCN1P31025 176 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 PSMB10P40306 273 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 MEOX2P50222 304 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 RBMS2Q15434 407 aaKnown RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 YOD1Q5VVQ6 348 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 B3GNTL1Q67FW5 361 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 RPL13AP3Q6NVV1 102 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 ESPNLQ6ZVH7 1005 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 SSX6Q7RTT6 188 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms