RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SLC22A24Q8N4F4 322 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 WDR31Q8NA23 367 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 OR51L1Q8NGJ5 315 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 NRG4Q8WWG1 115 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 SLC38A2Q96QD8 506 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 SNX18Q96RF0 628 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 IL4I1Q96RQ9 567 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 MBOAT4Q96T53 435 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 DDOQ99489 341 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 SH3GL3Q99963 347 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 GRIP2Q9C0E4 1043 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 ICE1Q9Y2F5 2266 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 SCG5P05408 212 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 PATE4P0C8F1 98 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 OR8G3PP0DMU2 310 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 PPP3CBP16298 524 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 IGFBP2P18065 325 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 CRABP1P29762 137 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 C12orf73Q69YU5 71 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 CPOQ8IVL8 374 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 TCEANCQ8N8B7 351 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 PROKR2Q8NFJ6 384 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 HSD17B8Q92506 261 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 HCAR1Q9BXC0 346 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 OR10A4Q9H209 315 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 OR51V1Q9H2C8 321 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 SMPD3Q9NY59 655 aaPredicted RBP12.16□□□□□ -0.46
TPM3-211ENST00000368531 SLC25A15Q9Y619 301 aa12.16□□□□□ -0.46
TPM3-211ENST00000368531 IGLV1-36A0A0B4J1U3 117 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 PRR23D1E9PI22 279 aaPredicted RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 TLX2O43763 284 aaPredicted RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 PRKYO43930 277 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 FARS2O95363 451 aaKnown RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 HLA-HP01893 362 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 HLA-DQA2P01906 255 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 PRR23D2P0DMB1 279 aaPredicted RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 EPXP11678 715 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 PAICSP22234 425 aaKnown RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 LAP3P28838 519 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 PEX19P40855 299 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 ZNF83P51522 516 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 MRPS34P82930 218 aaKnown RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 RIPK1Q13546 671 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 MEP1BQ16820 701 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 KLHL12Q53G59 568 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 P2RY8Q86VZ1 359 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 GLB1L2Q8IW92 636 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 C17orf78Q8N4C9 275 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 OR6K6Q8NGW6 343 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 OR2T4Q8NH00 348 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 FAM222BQ8WU58 562 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 ZNRF4Q8WWF5 429 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 PTP4A1Q93096 173 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 DACH2Q96NX9 599 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 SPOCK3Q9BQ16 436 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 RNF121Q9H920 327 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 HINT3Q9NQE9 182 aaKnown RBP12.15□□□□□ -0.46
TPM3-211ENST00000368531 POLE4Q9NR33 117 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 ZNF226Q9NYT6 803 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 AMDHD2Q9Y303 409 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 GMPPBQ9Y5P6 360 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 FKBP7Q9Y680 259 aa12.15□□□□□ -0.46
TPM3-211ENST00000368531 PRR14LQ5THK1 2151 aa12.15□□□□□ -0.47
TPM3-211ENST00000368531 MYO18BQ8IUG5 2567 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 ZNF503-AS2A6NEH8 195 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 TVP23AA6NH52 213 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 M0R1B8 84 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 WNT11O96014 354 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 SPI1P17947 270 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 NPR2P20594 1047 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 SLC25A1P53007 311 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 LYPD4Q6UWN0 246 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 ZNF627Q7L945 461 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 CXXC5Q7LFL8 322 aaKnown RBP12.14□□□□□ -0.47
TPM3-211ENST00000368531 SLC16A14Q7RTX9 510 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 BCDIN3DQ7Z5W3 292 aaKnown RBP12.14□□□□□ -0.47
TPM3-211ENST00000368531 ZBTB46Q86UZ6 589 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 MDP1Q86V88 176 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 PACRGLQ8N7B6 248 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 ZNF555Q8NEP9 628 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 BBS1Q8NFJ9 593 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 FAM81AQ8TBF8 368 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 C11orf40Q8WZ69 217 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 UBE2FQ969M7 185 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 NABP1Q96AH0 204 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 KCNN2Q9H2S1 579 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 VCXQ9H320 206 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 SIAEQ9HAT2 523 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 C8orf4Q9NR00 106 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 FAM118AQ9NWS6 357 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 NPAP1Q9NZP6 1156 aa12.14□□□□□ -0.47
TPM3-211ENST00000368531 LOC100130705A0A1B0GUX0 176 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 DLGAP1O14490 977 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms