RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SH3PXD2BA1X283 911 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 CD14P08571 375 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 ITGA2P17301 1181 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 GLRXP35754 106 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 PPOXP50336 477 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 MNAT1P51948 309 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 DSCR9P59020 149 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 MXRA7P84157 204 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 SLC36A2Q495M3 483 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 TMEM53Q6P2H8 277 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 SVOPLQ8N434 492 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 LRRC18Q8N456 261 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 PAQR4Q8N4S7 273 aaPredicted RBP16.33■□□□□ 0.2
CKS1B-203ENST00000368439 CCDC197Q8NCU1 140 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 OR52J3Q8NH60 311 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 FNDC8Q8TC99 324 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 NSMAFQ92636 917 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 RBP7Q96R05 134 aa16.33■□□□□ 0.2
CKS1B-203ENST00000368439 A6NIZ1 184 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 NR2C1P13056 603 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 ATP6V1B2P21281 511 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 HIVEP2P31629 2446 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 RAP1BP61224 184 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 RAP1AP62834 184 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 MESTQ5EB52 335 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 CLEC2AQ6UVW9 174 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 THSD4Q6ZMP0 1018 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 RINLQ6ZS11 566 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 SLC30A7Q8NEW0 376 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 C10orf105Q8TEF2 133 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 MRPL24Q96A35 216 aaKnown RBP16.32■□□□□ 0.2
CKS1B-203ENST00000368439 Q96M85 177 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 GPX7Q96SL4 187 aaPredicted RBP16.32■□□□□ 0.2
CKS1B-203ENST00000368439 MRPL37Q9BZE1 423 aaKnown RBP16.32■□□□□ 0.2
CKS1B-203ENST00000368439 RNF121Q9H920 327 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 IL1RAPQ9NPH3 570 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 NRIP3Q9NQ35 241 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 CMAHPQ9Y471 501 aa16.32■□□□□ 0.2
CKS1B-203ENST00000368439 VSTM5A8MXK1 200 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 H7C1C5 153 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 NDUFB2O95178 105 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 FABP3P05413 133 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 CCL2P13500 99 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 RPL4P36578 427 aaKnown RBP16.31■□□□□ 0.2
CKS1B-203ENST00000368439 EVX1P49640 407 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 LCN6P62502 163 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 FAM27BQ5VT28 67 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 ZER1Q7Z7L7 766 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 ZCCHC24Q8N2G6 241 aaKnown RBP16.31■□□□□ 0.2
CKS1B-203ENST00000368439 CPEB3Q8NE35 698 aaKnown RBP16.31■□□□□ 0.2
CKS1B-203ENST00000368439 FAM168AQ92567 244 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 RSRC1Q96IZ7 334 aaKnown RBP16.31■□□□□ 0.2
CKS1B-203ENST00000368439 VRK1Q99986 396 aaPredicted RBP16.31■□□□□ 0.2
CKS1B-203ENST00000368439 C1orf198Q9H425 327 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 ACTR3BQ9P1U1 418 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 GRHPRQ9UBQ7 328 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 SLC7A8Q9UHI5 535 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 SPEF1Q9Y4P9 236 aa16.31■□□□□ 0.2
CKS1B-203ENST00000368439 TCRBV5S2A0A599 114 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 SLC22A23A1A5C7 686 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 VWC2LB2RUY7 222 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 GADD45GO95257 159 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 SNAP29O95721 258 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 SCG5P05408 212 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 ZNF32P17041 273 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 CALB2P22676 271 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 GALK2Q01415 458 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 SPIBQ01892 262 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 SGCAQ16586 387 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 PABPC1L2AQ5JQF8 200 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 LRP11Q86VZ4 500 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 FBXO9Q9UK97 447 aaPredicted RBP16.3■□□□□ 0.2
CKS1B-203ENST00000368439 FKBP7Q9Y680 259 aa16.3■□□□□ 0.2
CKS1B-203ENST00000368439 TEX13CA0A0J9YWL9 993 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 UNC119BA6NIH7 251 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 AHCYL1O43865 530 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 CST2P09228 141 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 CSF3P09919 207 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 SLC25A16P16260 332 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 APEX1P27695 318 aaKnown RBP16.29■□□□□ 0.2
CKS1B-203ENST00000368439 LAP3P28838 519 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 RRM2P31350 389 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 SMIM11AP58511 58 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 PSG4Q00888 419 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 LOXL1Q08397 574 aaPredicted RBP16.29■□□□□ 0.2
CKS1B-203ENST00000368439 KRTAP21-3Q3LHN1 58 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 CYP2R1Q6VVX0 501 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 ZDHHC21Q8IVQ6 265 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 ARHGAP24Q8N264 748 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 MCUR1Q96AQ8 359 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 RASD2Q96D21 266 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 ZNF570Q96NI8 536 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 MYEF2Q9P2K5 600 aaKnown RBP16.29■□□□□ 0.2
CKS1B-203ENST00000368439 IL20RAQ9UHF4 553 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 AURKCQ9UQB9 309 aa16.29■□□□□ 0.2
CKS1B-203ENST00000368439 PRSS37A4D1T9 235 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 IMPA2O14732 288 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 TXNDC12O95881 172 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 PTHP01270 115 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms