RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SGTBQ96EQ0 304 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 SIKE1Q9BRV8 207 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 SMURF2Q9HAU4 748 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 NPHS2Q9NP85 383 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 C20orf141Q9NUB4 165 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 STX18Q9P2W9 335 aaKnown RBP13.65□□□□□ -0.22
CKS1B-202ENST00000368436 BAG5Q9UL15 447 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 IGHV1-69-2A0A0G2JMI3 117 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 HMGB1P1B2RPK0 211 aaPredicted RBP13.64□□□□□ -0.23
CKS1B-202ENST00000368436 MCIDASD6RGH6 385 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 EDF1O60869 148 aaKnown RBP13.64□□□□□ -0.23
CKS1B-202ENST00000368436 DEAF1O75398 565 aaPredicted RBP13.64□□□□□ -0.23
CKS1B-202ENST00000368436 PNPP00491 289 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 THRBP10828 461 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 TNFRSF1BP20333 461 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 APLNRP35414 380 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 SCGB2A2Q13296 93 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 PIN1Q13526 163 aaPredicted RBP13.64□□□□□ -0.23
CKS1B-202ENST00000368436 RABL3Q5HYI8 236 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 ACSM5Q6NUN0 579 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 C1orf229Q6ZS94 237 aaPredicted RBP13.64□□□□□ -0.23
CKS1B-202ENST00000368436 MOSPD2Q8NHP6 518 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 GTF3AQ92664 365 aaKnown RBP13.64□□□□□ -0.23
CKS1B-202ENST00000368436 HDAC2Q92769 488 aaKnown RBP13.64□□□□□ -0.23
CKS1B-202ENST00000368436 LRRC58Q96CX6 371 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 POM121L2Q96KW2 1035 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 SH3GL1Q99961 368 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 KCNN2Q9H2S1 579 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 ZNF665Q9H7R5 613 aa13.64□□□□□ -0.23
CKS1B-202ENST00000368436 TANC2Q9HCD6 1990 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 FXYD1O00168 92 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 SLC2A10O95528 541 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 AVPP01185 164 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 MT-ND5P03915 603 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 ZNF32P17041 273 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 STOMP27105 288 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 CDAP32320 146 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 WNT5AP41221 380 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 MVKQ03426 396 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 HSF2Q03933 536 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 LAPTM4AQ15012 233 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 AVPI1Q5T686 147 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 FAHD2BQ6P2I3 314 aaPredicted RBP13.63□□□□□ -0.23
CKS1B-202ENST00000368436 SHQ1Q6PI26 577 aaKnown RBP13.63□□□□□ -0.23
CKS1B-202ENST00000368436 SLC25A47Q6Q0C1 308 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 C12orf54Q6X4T0 127 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 USP51Q70EK9 711 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 TEX29Q8N6K0 151 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 OR8J3Q8NGG0 315 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 FAHD2AQ96GK7 314 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 TXNIPQ9H3M7 391 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 CCNB1IP1Q9NPC3 277 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 DECR2Q9NUI1 292 aa13.63□□□□□ -0.23
CKS1B-202ENST00000368436 DYSFO75923 2080 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 LOC100509620A0A075B734 347 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 IGKV1D-43A0A0B4J1Z2 117 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 A0A0G2JND7 137 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 PLPP2O43688 288 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 SHOX2O60902 331 aaPredicted RBP13.62□□□□□ -0.23
CKS1B-202ENST00000368436 MPZL1O95297 269 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 NPPAP01160 153 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 DRD4P21917 467 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ZNF81P51508 661 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 MMP15P51511 669 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 PSG4Q00888 419 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 FMODQ06828 376 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ZNF718Q3SXZ3 478 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 COQ5Q5HYK3 327 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 TMEM255AQ5JRV8 349 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 FAM209AQ5JX71 171 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 FAM27BQ5VT28 67 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ERICH5Q6P6B1 374 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 USP43Q70EL4 1123 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ZNF101Q8IZC7 436 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ICA1LQ8NDH6 482 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ZNF418Q8TF45 676 aaPredicted RBP13.62□□□□□ -0.23
CKS1B-202ENST00000368436 RAB39BQ96DA2 213 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 MARS2Q96GW9 593 aaKnown RBP13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ZNF583Q96ND8 569 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 ECSITQ9BQ95 431 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 HIF3AQ9Y2N7 669 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 MED31Q9Y3C7 131 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 WIPI2Q9Y4P8 454 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 CACNG2Q9Y698 323 aa13.62□□□□□ -0.23
CKS1B-202ENST00000368436 HTR3EA5X5Y0 456 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 GMNCA6NCL1 334 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 CLDN25C9JDP6 229 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 ICMTO60725 284 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 IFNA14P01570 189 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 IGHV1-46P01743 117 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 IGHV2-5P01817 119 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 NR2C1P13056 603 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 CCNOP22674 350 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 CFPP27918 469 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 OR1E2P47887 323 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 ARFIP2P53365 341 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 GLO1Q04760 184 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 TAF11Q15544 211 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms